DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12099 and Rnf170

DIOPT Version :9

Sequence 1:NP_647623.1 Gene:CG12099 / 38181 FlyBaseID:FBgn0035232 Length:708 Species:Drosophila melanogaster
Sequence 2:NP_001344222.2 Gene:Rnf170 / 77733 MGIID:1924983 Length:257 Species:Mus musculus


Alignment Length:57 Identity:19/57 - (33%)
Similarity:25/57 - (43%) Gaps:15/57 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 ELQCPICLYPPVAAKLTRCGHAYCWPCLLHYLSLSDKTWR--------KCPICYDAI 257
            |:.|||||:.......|.|||.:|..|::.|       ||        .||||...:
Mouse    83 EMYCPICLHQASFPVETNCGHLFCGSCIIAY-------WRYGSWLGAISCPICRQTV 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12099NP_647623.1 zf-C3HC4_2 212..253 CDD:290634 16/48 (33%)
Rnf170NP_001344222.2 RING-HC_RNF170 86..129 CDD:319467 17/49 (35%)
RING-HC finger (C3HC4-type) 86..128 CDD:319467 16/48 (33%)
DUF1232 203..236 CDD:311019
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1987
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.930

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