DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12099 and rnf10

DIOPT Version :9

Sequence 1:NP_647623.1 Gene:CG12099 / 38181 FlyBaseID:FBgn0035232 Length:708 Species:Drosophila melanogaster
Sequence 2:XP_012814046.1 Gene:rnf10 / 395022 XenbaseID:XB-GENE-854662 Length:754 Species:Xenopus tropicalis


Alignment Length:815 Identity:259/815 - (31%)
Similarity:372/815 - (45%) Gaps:187/815 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSNNSSNSKKQPQSSHHGKSSSAESQRKSSELHTNSNKQRHSRRRNQVPTPRNDQ---QQQPQQ 62
            ||..:::.:|.|.:|...|  .|.||:.||...:.||:|||::|:|.. ..|:|:.   |.:...
 Frog    12 MDPGSANANKNQNRSGSAG--PSGESKPKSEPKNGNSSKQRYNRKREN-SYPKNETFAGQSRRSC 73

  Fly    63 PAKLRPNVDKRPKARGFGGGYDFPSPRGQDGASGSSRLAYSATGYSRSGDFDHELNSVYTQGSKK 127
            |.|.: ..:|.|..|  ||...:...|.::.|. :.|..:|:..||               |.||
 Frog    74 PQKSK-TFNKVPPQR--GGPKQYGMGRREEVAE-TQRAEFSSAQYS---------------GPKK 119

  Fly   128 QNLNHLLNFHCVPRELERGHHHQAQQHHGLSGRKQR-----YNKEQFLQANFQFVIRSGAKAQVN 187
            .||||||||...||     .|......:|..||:.:     :|||.|||||.|||:.......|:
 Frog   120 INLNHLLNFTFEPR-----GHPGGLNGNGNFGRRHKWGNKPFNKELFLQANCQFVVSDDNDYSVH 179

  Fly   188 -GSPDALIDWSYIEQINIQTTEELQCPICLYPPVAAKLTRCGHAYCWPCLLHYLSLSDKTWRKCP 251
             ..||.|:.|.::||:.|.:.|...||||||||||||:|||||.:||.|:|||||||:|.|.:||
 Frog   180 FADPDTLVSWDFVEQVRIFSHEVPSCPICLYPPVAAKITRCGHIFCWACILHYLSLSEKDWSRCP 244

  Fly   252 ICYDAIHAGDLKSCTIEQLRDLQVGEKITFQLMRRRKGS---------MYIEN--HVAGLGETIE 305
            |||.::...||||....:.....||:|||.|||||.||.         |.::.  |:..|..|: 
 Frog   245 ICYSSVIKKDLKSVVTTETHLYSVGDKITMQLMRREKGVLVAMPKSKWMKLDEPIHLGDLDHTL- 308

  Fly   306 RFPFVSAGEEAKRYSKFLIAKRMDV-AAIIERERNELLAE--SDVSCPEDVFIQQALVMLQER-- 365
                         |||.|:|.|..: :.:|..|:..||.:  ::...||..||:.|:..||:|  
 Frog   309 -------------YSKLLLASRDQILSQVIGEEKVALLEQYNAEKETPEACFIEAAMQELQDRAG 360

  Fly   366 ----------------VEKLGVEKPDPKED--------------EEETAPVLCLE---TETK--- 394
                            :|.|..|....|:.              ||||....|.:   ||:.   
 Frog   361 NLCAASKPEIEAATLSMEALNFESTSDKQHTVLEREVVHYISAFEEETMEPPCEDCSPTESSPPD 425

  Fly   395 ------IDIEKSDDA---SISSGEASSSLSYSSNHNKYYYFYQSNDGQNIYLHPLNVKMLQACYG 450
                  .|:..:.|.   |:|..|:.........::.||||||:.|||::||||:||:.|...||
 Frog   426 ITAVLATDVSTATDGGLPSLSQQESKPENCGPLGNSHYYYFYQAVDGQHVYLHPVNVRCLVHEYG 490

  Fly   451 TLDLGPLLIEAQIVQMEQHSMDEEHRRKFTCLGHLPLTCQFSVVEVELQPPVVTGGILKLFKEDI 515
            :|:..|..|.|.:|:|:..:|.||.||:...|.||||||:||:.|:.|.||.|:...|:||..::
 Frog   491 SLERCPEKITATVVEMDGFTMTEEVRRRHRYLCHLPLTCEFSICEMALGPPDVSVDTLELFTAEV 555

  Fly   516 LHRKKERQRRDREERKREQHINEINDRQMGKLIASAANLDLSSSHEFP--------------TCG 566
            ..||:.|||:.|:|::||:.|....:::.|  |...|.:.|.:..:||              |..
 Frog   556 EKRKRLRQRKARDEQRREKRIELEENKKQG--IYPEARIALENLQQFPAFSSSPIDSLFNVETQN 618

  Fly   567 FEEALP------APSGSVPMNISNQDP-----GSRYSS----VTLGSPKQEMWPTIGSNSPGGGG 616
            |....|      :.|||:.....:.||     .||..|    :.:|..|.|.||.         .
 Frog   619 FISVSPLSCSPTSQSGSLLGAECSSDPLLTEDESRCPSFAQMLRVGKAKPETWPK---------A 674

  Fly   617 APLDVQVGAWGRSAPPPPRAVMVPRTSDEDFE------------QRSVGHWGLGELLVGALDQKK 669
            ||.:|            |...:.|..:|.|.|            |.|...         |::...
 Frog   675 APKNV------------PENTLTPANADSDVESDCSERVPVPSFQNSFSQ---------AMEAAF 718

  Fly   670 QKVGAAKSNGAAPAESKKQKKAKGKKMVPLFATGM 704
            .|:.||.   ..|...:|..|.|.|:...||:|.:
 Frog   719 LKLDAAL---PTPPSVEKGGKKKKKQQKLLFSTSI 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12099NP_647623.1 zf-C3HC4_2 212..253 CDD:290634 31/40 (78%)
rnf10XP_012814046.1 RING-HC_RNF10 205..247 CDD:319450 32/41 (78%)
RING-HC finger (C3HC4-type) 205..246 CDD:319450 31/40 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 149 1.000 Domainoid score I4402
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40990
Inparanoid 1 1.050 309 1.000 Inparanoid score I2572
OMA 1 1.010 - - QHG51969
OrthoDB 1 1.010 - - D1373540at2759
OrthoFinder 1 1.000 - - FOG0005735
OrthoInspector 1 1.000 - - oto104965
Panther 1 1.100 - - LDO PTHR12983
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4131
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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