DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12099 and Rnf10

DIOPT Version :9

Sequence 1:NP_647623.1 Gene:CG12099 / 38181 FlyBaseID:FBgn0035232 Length:708 Species:Drosophila melanogaster
Sequence 2:XP_038945196.1 Gene:Rnf10 / 288710 RGDID:1309282 Length:810 Species:Rattus norvegicus


Alignment Length:846 Identity:259/846 - (30%)
Similarity:384/846 - (45%) Gaps:196/846 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSNNSSNSKKQPQSSHHG----KSSSA----ESQRKSSELHTNSNKQRHSRRRNQVPTPRNDQQ 57
            ||.|:.|||......|..|    :|:||    ||:.||...::|.:|:.:.:|....|...|...
  Rat    15 MDKNSGSNSSSASSGSSKGQQPPRSASAGPAGESKPKSDGKNSNGSKRYNRKREPSYPKNENFSN 79

  Fly    58 QQPQQPAKLRPNVDKRPKARGFGGGYDFPSPRG---QDGASGSSRLAYSATGYSRSGDFDHELNS 119
            |..:..::.....:|.|..||.|....|.|...   :|..:.:.|..:|...:|           
  Rat    80 QSRRSNSQKSKTFNKTPPQRGGGSSKPFSSSSNGGRRDEVAEAQRAEFSPAQFS----------- 133

  Fly   120 VYTQGSKKQNLNHLLNFHCVPRELERGHHHQAQQHHGLSGRKQR-----YNKEQFLQANFQFVIR 179
                |.||.||||||||...||. :.||...:  .||..|::.:     :|||.|||||.|||:.
  Rat   134 ----GPKKINLNHLLNFTFEPRG-QAGHFEGS--GHGSWGKRNKWGHKPFNKELFLQANCQFVVS 191

  Fly   180 SGAKAQVN-GSPDALIDWSYIEQINIQTTEELQCPICLYPPVAAKLTRCGHAYCWPCLLHYLSLS 243
            .......| ..||.|::|.::||:.|.:.|...||||||||.|||:|||||.:||.|:|||||||
  Rat   192 EDQDYTANFADPDTLVNWDFVEQVRICSHEVPSCPICLYPPTAAKITRCGHIFCWACILHYLSLS 256

  Fly   244 DKTWRKCPICYDAIHAGDLKSCTIEQLRDLQVGEKITFQLMRRRKG-------SMYIE-NHVAGL 300
            ::||.||||||.::|..||||....:.|...||:.||.|||:|.||       |.::. :|...|
  Rat   257 ERTWSKCPICYSSVHKKDLKSVVATESRQYVVGDTITMQLMKREKGVLVALPKSKWMNVDHPISL 321

  Fly   301 GETIERFPFVSAGEEAKRYSKFLIAKRMDV--AAIIERE--RNELLAESDVSCPEDVFIQQAL-- 359
            |:           |:..:|||.|:|.:..|  ..::|.:  ..:.||| :...||..||:.||  
  Rat   322 GD-----------EQHSQYSKLLLASKEQVLHRVVLEEKVALEQQLAE-EKHTPESCFIEAALQE 374

  Fly   360 VMLQER------------------VEKLGVEKPDPKED---------------EEETAPVLCL-- 389
            |.::|.                  :|:|.:..|..||.               :||.|.|..|  
  Rat   375 VKIREEALSGVAGGRAEVTGVVTALEQLVLMAPLAKESAFQPRKGVLEYLSAFDEEAAQVCSLDP 439

  Fly   390 ----------ETETKIDIEKSDDA----SISSGEASSSLSYSS----------NHNKYYYFYQSN 430
                      |.|...:.|..:|.    |:..|...:.||...          :.:..|||||:.
  Rat   440 PGPLALPLVEEEEAVSEPEACEDLIADDSLGEGTVCAELSQEEPIAKPGFTQLSSSPCYYFYQAE 504

  Fly   431 DGQNIYLHPLNVKMLQACYGTLDLGPLLIEAQIVQMEQHSMDEEHRRKFTCLGHLPLTCQFSVVE 495
            |||:::|||:||:.|...||:|:..|..|.|.:|::..:||.|:.|::...|.||||||:||:.|
  Rat   505 DGQHMFLHPVNVRCLVREYGSLEQSPEKISATVVEIAGYSMSEDVRQRHRYLSHLPLTCEFSICE 569

  Fly   496 VELQPPVVTGGILKLFKEDILHRKKERQRRDREERKREQHINEINDRQMGKLIASAANLDLSSSH 560
            :.||||||:...|::|.:||..||::||::.||||:||:.|....:::.|:.  ...::.|.:..
  Rat   570 LALQPPVVSKETLEMFSDDIEKRKRQRQKKAREERRRERRIELEENKRQGRY--PEVHIPLENLQ 632

  Fly   561 EFP-----TCGFEEALPAPS----GSVPMNISNQDPGSRYS--------SVTLGSP--------- 599
            :||     ||..:.||...|    |::.::..::.|||...        :.:.|||         
  Rat   633 QFPAFNSYTCSSDSALGPTSTEGHGALSLSPLSRSPGSHADFLLTPLSPTASQGSPSFCVGSLEE 697

  Fly   600 ----------------KQEMWPTIGSNSPGGGGAPLDVQVGAW---GRSAPPPPRAVMVPRTSDE 645
                            |.:.||.         .||..|.:..:   ...|||.|    |....:.
  Rat   698 DSPFLSFAQMLRVGKAKADGWPK---------AAPKKVSLSCFLDDNSLAPPAP----VDSDGES 749

  Fly   646 DFEQRSVGHWGLGELLVGALDQK-KQKVGAAKSNGAAPA------ESKKQKKAKGKKMVPLFATG 703
            |...|         :.|.:.... .|.:.||......||      |.:..:|.|.:|...||:|.
  Rat   750 DNSDR---------VPVPSFQNSFSQAIEAAFMKLDTPATSDPLSEDRGGRKRKRQKQKLLFSTS 805

  Fly   704 M 704
            :
  Rat   806 V 806

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12099NP_647623.1 zf-C3HC4_2 212..253 CDD:290634 31/40 (78%)
Rnf10XP_038945196.1 RING-HC_RNF10 225..267 CDD:319450 32/41 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343770
Domainoid 1 1.000 156 1.000 Domainoid score I4117
eggNOG 1 0.900 - - E1_KOG2164
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40990
Inparanoid 1 1.050 324 1.000 Inparanoid score I2415
OMA 1 1.010 - - QHG51969
OrthoDB 1 1.010 - - D1373540at2759
OrthoFinder 1 1.000 - - FOG0005735
OrthoInspector 1 1.000 - - oto98269
orthoMCL 1 0.900 - - OOG6_102933
Panther 1 1.100 - - LDO PTHR12983
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4131
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

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