DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcyt2 and pcyt1ab

DIOPT Version :9

Sequence 1:NP_647622.1 Gene:Pcyt2 / 38180 FlyBaseID:FBgn0035231 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001018571.1 Gene:pcyt1ab / 553770 ZFINID:ZDB-GENE-050522-114 Length:359 Species:Danio rerio


Alignment Length:285 Identity:162/285 - (56%)
Similarity:204/285 - (71%) Gaps:17/285 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 QPAPFSYDDKAMLELERCDYTQRITYHMARAGKTTRR-VRVYADGIYDLFHQGHARQLMQAKNVF 105
            :||||:.:    |......|. |::...|..|....| ||||||||:|:||.||||.|||||.:|
Zfish    41 EPAPFADE----LVTPESAYA-RVSMEDALRGTPEERPVRVYADGIFDMFHSGHARALMQAKCLF 100

  Fly   106 PNVYLIVGVCNDELTLRMKGRTVMNGFERYEAVRHCRYVDEIVPNAPWTLNEEFIEEHKIDFVAH 170
            ||.|||||||:|:||.:.||.||||..|||:||.|||||||:|.||||||:.||:.||:||||||
Zfish   101 PNTYLIVGVCSDDLTHKFKGFTVMNEDERYDAVCHCRYVDEVVRNAPWTLSPEFLAEHRIDFVAH 165

  Fly   171 DDIPYGAGGVNDIYAPLKAKGMFVATERTEGVSTSDIVARIVKDYDVYVRRNLARGYSAKELNVS 235
            |||||.:.|.:|:|..:|..|||..|:||||:|||||:.|||:||||||||||.|||:|||||||
Zfish   166 DDIPYISAGTDDVYRHIKDAGMFAPTQRTEGISTSDIITRIVRDYDVYVRRNLQRGYTAKELNVS 230

  Fly   236 FLSEKKFRLQNKMDELK-------TRGKRELTKVK---VDIITKWEEKSREFIDAFLLLFGRE-R 289
            |::|||:.||..:|::|       .:.|..:.||:   :|:|.||||||||||..||.:||.: .
Zfish   231 FINEKKYHLQEHVDKVKQKVRNVEEKSKEFVQKVEEKGIDLIQKWEEKSREFIGNFLQMFGPDGA 295

  Fly   290 LNTFWNESKGRIIQALSPPGSPNGS 314
            |.....|.|||::||:||..||:.|
Zfish   296 LKHMLKEGKGRMLQAISPRQSPSSS 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pcyt2NP_647622.1 PLN02413 75..334 CDD:215229 153/252 (61%)
CCT 77..226 CDD:173925 104/149 (70%)
pcyt1abNP_001018571.1 CCT 72..221 CDD:173925 104/148 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579931
Domainoid 1 1.000 199 1.000 Domainoid score I3006
eggNOG 1 0.900 - - E1_COG0615
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 327 1.000 Inparanoid score I2448
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1172502at2759
OrthoFinder 1 1.000 - - FOG0001344
OrthoInspector 1 1.000 - - mtm6570
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10739
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X834
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.860

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