DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcyt2 and pcyt1a

DIOPT Version :9

Sequence 1:NP_647622.1 Gene:Pcyt2 / 38180 FlyBaseID:FBgn0035231 Length:381 Species:Drosophila melanogaster
Sequence 2:XP_002934091.3 Gene:pcyt1a / 100496938 XenbaseID:XB-GENE-1001244 Length:400 Species:Xenopus tropicalis


Alignment Length:313 Identity:168/313 - (53%)
Similarity:223/313 - (71%) Gaps:16/313 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ATPTSPMEFKMLPLFMDFEDFSICQPAPFSYDDKAMLELERCDYTQRITYHMARAGKTTRR-VRV 81
            |.|....:...:|:.:......:.:|||||.:    |:::|.:..:|::...|:.|....| |||
 Frog    52 AGPNGTTDEDHVPIKVARHTMGVREPAPFSDE----LKVDRSNTYRRVSMEEAKLGTPIERPVRV 112

  Fly    82 YADGIYDLFHQGHARQLMQAKNVFPNVYLIVGVCNDELTLRMKGRTVMNGFERYEAVRHCRYVDE 146
            |||||:||||.||||.||||||:|||.:||||||:||||..:||.||||..|||:||:|||||||
 Frog   113 YADGIFDLFHSGHARALMQAKNLFPNTHLIVGVCSDELTHNLKGFTVMNEAERYDAVQHCRYVDE 177

  Fly   147 IVPNAPWTLNEEFIEEHKIDFVAHDDIPYGAGGVNDIYAPLKAKGMFVATERTEGVSTSDIVARI 211
            :|.||||||:.||:|:|:|||||||||||.:.|.:|:|..:|..|||..|:||||:|||||:.||
 Frog   178 VVRNAPWTLSPEFLEKHRIDFVAHDDIPYSSAGSDDVYKHIKDAGMFAPTQRTEGISTSDIITRI 242

  Fly   212 VKDYDVYVRRNLARGYSAKELNVSFLSEKKFRLQNKMDELKTRGK----------RELTKVKVDI 266
            |:||||||||||.|||:||||||||::||:|.||.::|::|.:.|          :::.:..:|:
 Frog   243 VRDYDVYVRRNLQRGYTAKELNVSFINEKRFNLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDM 307

  Fly   267 ITKWEEKSREFIDAFLLLFGRE-RLNTFWNESKGRIIQALSPPGSPNGSVNGD 318
            |.||||||||||..||.:||.| .|.....|.|||::||:||..||:.|...|
 Frog   308 IQKWEEKSREFIGNFLEMFGPEGALKHMLKEGKGRMLQAISPKQSPSSSPTRD 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pcyt2NP_647622.1 PLN02413 75..334 CDD:215229 155/256 (61%)
CCT 77..226 CDD:173925 106/149 (71%)
pcyt1aXP_002934091.3 CCT 108..257 CDD:173925 106/148 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 203 1.000 Domainoid score I2893
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3680
Inparanoid 1 1.050 334 1.000 Inparanoid score I2365
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1172502at2759
OrthoFinder 1 1.000 - - FOG0001344
OrthoInspector 1 1.000 - - mtm9481
Panther 1 1.100 - - LDO PTHR10739
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R892
SonicParanoid 1 1.000 - - X834
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.100

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