Sequence 1: | NP_647620.1 | Gene: | pns / 38178 | FlyBaseID: | FBgn0035229 | Length: | 1449 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005159157.1 | Gene: | dennd4a / 558211 | ZFINID: | ZDB-GENE-060503-285 | Length: | 1724 | Species: | Danio rerio |
Alignment Length: | 1341 | Identity: | 248/1341 - (18%) |
---|---|---|---|
Similarity: | 404/1341 - (30%) | Gaps: | 544/1341 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 105 AYKSKPLAHYPENVPWNPFDA----HGICMLSLPQGLRFRT----QKHCIEPRFHSFATTREDGK 161
Fly 162 RCYGFSLVFYEEIRNRNICGAIHTLQSMFITELSNGQQTHSLSRVKQDGPVSRSLPRHFKVAGQA 226
Fly 227 PQSAQSYYDINKDKLYVAKSITLICQAPYAFAAQMFLKNLYRCLPRQPGAGISLESYVYNILYEV 291
Fly 292 MLPQPGK-SIRVYLPPTEPHLPPIALILQRPLLATELPLLDFPLRLLFKYLGVECVIQLLTCVLL 355
Fly 356 ENQVLLRSTDYQRLMIVGECITSLLFPFVWPHVYAPILPAALHHFLDAPVPFVMGLHAECEAAHK 420
Fly 421 IGSEATLCFVDIDKKHIQLPEE--------LP--VFPHKVDFMAEIGSVLDK-FEIERDRDQEPS 474
Fly 475 FRNGYVGRGAGGGVSGSGSSGSGGVDAMISSCTLPTGLQAARRSKERFQQMQETVYTLSGSPGGG 539
Fly 540 VVDYQPLIAHPSRIDHVPRIADFLRRKGGIRGAGSPVGSPTVSLSSSPVGIYHDVDAVDATMPVS 604
Fly 605 TRRAEKQKLSPVDQYYQDLRINNSVREIFLNRFVHMFHAYEYFVIYPNQARDEWISNRETLQNFD 669
Fly 670 KSSFLSDQPEHHRAFLSRFLESQMFATLIDNKILAMWESQPDEQLQLFDQRV-KLLRRRHGENMI 733
Fly 734 AATSYEPCVLSQDSQQGFEKRLNCID--------IEVTPPSEILANRAAYFRSFPLLEKG----- 785
Fly 786 --------VLNQECASRGNSLRRVKNGNKWRAREISLDQKPGSNAINRLSANLTTADVSPALI-- 840
Fly 841 -AQANWTFVERLLKDIK------------------------------SKTK-------------- 860
Fly 861 -----------RMLLEKMGNEA-------VALGLKGDGIEENTLIASMCD--LLEKIWSHGLQNK 905
Fly 906 QGKSALW--------------------------AHLQAYLEMQE-ARGAGDSSG---------TE 934
Fly 935 QTPPVS----SSPGGKMTIATASPALAWNAMRKRMDYLSTFQTDF----DSPPSPNRSRSRDRNK 991
Fly 992 FVGLEQLCPLPESLEFDVKNVLAMADIKTHIGYTRAWVRLSLEKKLLSRHFRTLLSDEALLRSLY 1056
Fly 1057 KRSAFLRCEEEKEQFLYHLLTLNTVDYFSFTNIYPTTKLPYRVVIF-------------PSRKYG 1108
Fly 1109 SYHTSSNVWIMVSGTMNETQR--VPVPKGSLEFIFHYKNLGLLTTMRIGHDNSGPSHKWLVEQVV 1171
Fly 1172 MRNEVTGHTYKFPCGRWLGRGVDDDSTE------RLLVGQRVLTNAKNAELVPGSDTRTPPRTRS 1230
Fly 1231 PSVQRQETLAPSEIQHQLGN--------CVNVLVKWHYKPS 1263 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
pns | NP_647620.1 | uDENN | 70..171 | CDD:214824 | 18/73 (25%) |
DENN | 243..435 | CDD:214823 | 58/192 (30%) | ||
dDENN | 626..701 | CDD:129037 | 19/74 (26%) | ||
RUN | <989..1083 | CDD:295434 | 11/93 (12%) | ||
PLAT_RAB6IP1 | 1095..1203 | CDD:238855 | 25/128 (20%) | ||
RUN | 1376..1436 | CDD:214736 | |||
dennd4a | XP_005159157.1 | DUF2464 | 44..>198 | CDD:287242 | |
uDENN | 168..275 | CDD:214824 | 18/73 (25%) | ||
DENN | 307..491 | CDD:280329 | 58/193 (30%) | ||
dDENN | 559..632 | CDD:129037 | 20/121 (17%) | ||
PPR_2 | 816..856 | CDD:289786 | 7/39 (18%) | ||
PPR repeat | 818..847 | CDD:276811 | 5/28 (18%) | ||
PPR | 819..853 | CDD:273253 | 6/33 (18%) | ||
SEEEED | 921..1003 | CDD:291463 | 25/139 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3728 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |