DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12091 and Ppm1n

DIOPT Version :9

Sequence 1:NP_001261261.1 Gene:CG12091 / 38177 FlyBaseID:FBgn0035228 Length:321 Species:Drosophila melanogaster
Sequence 2:XP_006539883.1 Gene:Ppm1n / 232941 MGIID:2142330 Length:452 Species:Mus musculus


Alignment Length:401 Identity:79/401 - (19%)
Similarity:133/401 - (33%) Gaps:135/401 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SSFSTLLETATGGGSGAAAKG-------ATKSGATPGSSG----APRPRFVSVVCGFAKDNLRHK 71
            ::|..|||..     |.||:.       ..:..:.||:||    |||       |          
Mouse     2 AAFVRLLERL-----GWAARAQQVVEQEVEEECSVPGASGSLLAAPR-------C---------- 44

  Fly    72 YKPGKYGEDSWFKASTASADVMGV---ADGVGGWRSYGID-----------PGEFSSFLMRTCER 122
                      |.:....:|...|:   |..|.|||:...|           |..::.|.:.....
Mouse    45 ----------WQRLHRGAAATSGLRFGASAVQGWRARMEDAHCARLALPGLPSGWAFFAVLDGHG 99

  Fly   123 LVQCSHFN---------------PQRPVNL---LAYSYCELMEQKKPIL-----GSSTACVLILN 164
            ..:.:.|.               ||.|..:   |..::.:...|...:.     |.|||..|:::
Mouse   100 GARAARFGARHLPGYVLGELGPAPQEPDGVRQALRSAFLQADAQLSALWPRGDPGGSTAVALLVS 164

  Fly   165 RETSTVHTANIGDSGFVVVREGQVV--------HKSEEQQHYFNT-------PFQLSL------- 207
              ...::.|:.|||..::.|.|.|.        |:..|::...:.       ..:.||       
Mouse   165 --PRFLYLAHCGDSRALLSRSGSVAFCTEDHRPHRPRERERIHDAGGTVRRRRVEGSLAVSRALG 227

  Fly   208 -----PPPGHGP--NVLSDSPESADTMSFPVRDGD-VILIATDGVFDNVP--------------- 249
                 ..||..|  .::|..||.|   :...:|.| .:|:|:|||:|.:.               
Mouse   228 DFAYKQAPGRPPELQLVSAEPEVA---ALARQDEDEFVLLASDGVWDALSGADLAGLVTSRLRLG 289

  Fly   250 ---EDLMLQVLSE--VEGERDPVKLQMTANSLALMARTLSLNSEFLSPFALSARRNNIQARGGKP 309
               |.|..|:|..  .:|..|.:...:.....|......:::.|.....|||.:...:.|...:|
Mouse   290 LDLELLCAQLLDTCLCKGSLDNMTCMVVCFPGAPRPCEEAISKEMALDEALSHKVAELYASAQEP 354

  Fly   310 DDITVVLATVA 320
            ..:..|..|:|
Mouse   355 PGLNTVFRTLA 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12091NP_001261261.1 PP2Cc 76..316 CDD:294085 61/326 (19%)
Ppm1nXP_006539883.1 PP2Cc 59..319 CDD:238083 51/264 (19%)
PP2C_C 313..387 CDD:369544 10/53 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.