DRSC/TRiP Functional Genomics Resources

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Protein Alignment Psa and RNPEPL1

DIOPT Version :10

Sequence 1:NP_728614.1 Gene:Psa / 38175 FlyBaseID:FBgn0261243 Length:1075 Species:Drosophila melanogaster
Sequence 2:NP_060696.4 Gene:RNPEPL1 / 57140 HGNCID:10079 Length:725 Species:Homo sapiens


Alignment Length:469 Identity:112/469 - (23%)
Similarity:187/469 - (39%) Gaps:121/469 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 TQFEATDARRCFPCWDEPAIKATFDITLVVPKD-RVALS--NMPVIKEDSLPDGLRRVRFDRTPI 403
            ||..:...|..|||:|.||:|.|:...:..|.. :|.:|  ....::|:.:      ..|.....
Human   195 TQGHSVCNRSFFPCFDTPAVKCTYSAVVKAPSGVQVLMSATRSAYMEEEGV------FHFHMEHP 253

  Fly   404 MSTYLVAVVVGEYDYVEGKSDDGVLVRVFT-----PV------GKREQGTFALEVATKVL-PYYK 456
            :..||||:|.|:..    .:|.|...||:.     |.      |..||.   |..|.::. ||..
Human   254 VPAYLVALVAGDLK----PADIGPRSRVWAEPCLLPTATSKLSGAVEQW---LSAAERLYGPYMW 311

  Fly   457 DYFNIAYPLPKMDLIAISDFSAGAMENWGLVTYRETFVLVDPKNTSLMRKQSIALTVGHEIAHQW 521
            ..::|.:..|...::        ||||..|     ||::    ::.|...:.:.:.|.||:||.|
Human   312 GRYDIVFLPPSFPIV--------AMENPCL-----TFII----SSILESDEFLVIDVIHEVAHSW 359

  Fly   522 FGNLVTMEWWTHLWLNEGYASFVE-----------FLCVHHLFPEYDIWTQFVTDMYTRALEL-- 573
            |||.||...|..:||:||.|::.:           |.|:.         |.|..|...|.::|  
Human   360 FGNAVTNATWEEMWLSEGLATYAQRRITTETYGAAFTCLE---------TAFRLDALHRQMKLLG 415

  Fly   574 -DSLKNSHPIEVPVG-HPSEIDEIFDEISYNKGASVIRMLHDYIGE-DTFRKGMNLYLTRHQYGN 635
             ||..:...:::..| :||.:..:|   :|.||...:..|....|: ..|...:..|:.::::.:
Human   416 EDSPVSKLQVKLEPGVNPSHLMNLF---TYEKGYCFVYYLSQLCGDPQRFDDFLRAYVEKYKFTS 477

  Fly   636 TCTEDL-------WAALQEASSKNVSDV-MTSWTQHKGFPVVSVESEQTSKNQRLLRLKQCKFTA 692
            ...:||       :..|:|.|....:.: ...|....|.|:...:..|.|.   |.|..:..|. 
Human   478 VVAQDLLDSFLSFFPELKEQSVDCRAGLEFERWLNATGPPLAEPDLSQGSS---LTRPVEALFQ- 538

  Fly   693 DGSQADENCLWVV-PI-SVSTSKNPTGIAK--TF--------LLDKSSM--EVT----------L 733
                     ||.. |: ..:.|.:...|:|  ||        |||.|.:  ||.          |
Human   539 ---------LWTAEPLDQAAASASAIDISKWRTFQTALFLDRLLDGSPLPQEVVMSLSKCYSSLL 594

  Fly   734 DNVDED---DWIKI 744
            |:::.:   .|::|
Human   595 DSMNAEIRIRWLQI 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PsaNP_728614.1 M1_APN-Q_like 227..662 CDD:341064 87/358 (24%)
ERAP1_C 741..1055 CDD:463368 2/4 (50%)
RNPEPL1NP_060696.4 M1_LTA4H 29..512 CDD:341062 87/358 (24%)
Leuk-A4-hydro_C 560..673 CDD:462686 12/49 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 676..699
Blue background indicates that the domain is not in the aligned region.

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