DRSC/TRiP Functional Genomics Resources

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Protein Alignment Psa and rnpep

DIOPT Version :10

Sequence 1:NP_728614.1 Gene:Psa / 38175 FlyBaseID:FBgn0261243 Length:1075 Species:Drosophila melanogaster
Sequence 2:NP_001002741.2 Gene:rnpep / 437014 ZFINID:ZDB-GENE-040718-241 Length:624 Species:Danio rerio


Alignment Length:561 Identity:140/561 - (24%)
Similarity:215/561 - (38%) Gaps:137/561 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 NYQQIRRAHTQLLSKEQQLEQ--------ERKMAQKAKFERLPTNVVP--RHYELLLQPNLKEFT 240
            :::|.:..|..|..|...|::        |.:..|.::.| |..::.|  ..:|:.|..|.:::|
Zfish    20 SFRQFKIEHFHLDLKVDFLQKSISGTETIELQCIQDSQSE-LQLDIHPSLSVHEITLSQNARDWT 83

  Fly   241 FT----------GKTVVQVNVKEPTTQITLNALDIVLDSVELHFECSKLKPEKIVYSAENETAT- 294
            .|          |.|::   ||.||...:.:.|.:.                 |.|:|.:.... 
Zfish    84 RTEFLTQDFTSYGTTLL---VKFPTAFSSDDKLQLA-----------------IRYTATDGPGVC 128

  Fly   295 -LEFAQEIPAETQGVLHMSFTGELNDKMKGFYRSKYFGPNGEERFAGVTQFEATDARRCFPCWDE 358
             ||     |.:|.|            |:|.:.               .||.:|...|.||||:|.
Zfish   129 WLE-----PEQTAG------------KLKPYV---------------FTQGQAVLNRSCFPCFDT 161

  Fly   359 PAIKATFDITLVVPKDRVALSNMPVIK-EDSLPDGLRRVRFDRTPIMSTYLVAVVVGEYDYVEGK 422
            ||:|:|:...:.||:...|:  |...| |....||......:. || ..||||:.||:..    .
Zfish   162 PAVKSTYSAAVQVPEGFTAV--MSANKWEQRKADGAFLFTMEH-PI-PAYLVALAVGDLQ----S 218

  Fly   423 SDDGVLVRVFT-----PVGKREQGTFA---LEVATKVL-PYYKDYFNIAYPLPKMDLIAISDFSA 478
            ::.|...||:|     ...|:|.....   |.|..|:. ||....:::.:..|        .|..
Zfish   219 AEVGPRTRVWTEPCLLQAAKQEYDNVIEDFLSVGEKLFGPYVWGRYDVLFMPP--------SFPF 275

  Fly   479 GAMENWGLVTYRETFVLVDPKNTSLMRKQSIALTVGHEIAHQWFGNLVTMEWWTHLWLNEGYASF 543
            |.|||..|     |||    ....|...:|:|..:.|||.|.|||||||...|...|||||:..:
Zfish   276 GGMENPCL-----TFV----TPCLLAGDRSLADVIVHEICHSWFGNLVTNATWGDFWLNEGFTMY 331

  Fly   544 VEFLCVHHLFPEYDIWTQFVTDMYTRALELDSLKNSHP---IEVPVGHPSEIDEIFDEISYNKGA 605
            .:......|:.|.....:..|........:|:....||   :.|.:....:.|:.::|..|.||.
Zfish   332 AQRRVCRELYGEAYTCLEAATGKALLRQHMDNTGEDHPLNKLRVKIEPGVDPDDTYNETPYEKGF 396

  Fly   606 SVIRMLHDYIGE----DTFRKGMNLYLTRHQYGNTCTEDLWAALQ-------EASSKNVSDV--- 656
            ..:..|....|:    |||.|.   |:.:.::.:...||   ||:       |...:||..:   
Zfish   397 CFVSYLAHLTGDQSRFDTFLKA---YVEKFKFRSVLAED---ALEFYLEYFPELKERNVHKIEGL 455

  Fly   657 -MTSWTQHKGFP--VVSVESEQT-SKNQRLLRLKQCKFTAD 693
             ..||....|:|  |..:.:.|| .|...||..|......|
Zfish   456 DFDSWLNVPGWPPYVPDLSAGQTLMKPAELLAEKWLSHNLD 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PsaNP_728614.1 M1_APN-Q_like 227..662 CDD:341064 120/474 (25%)
ERAP1_C 741..1055 CDD:463368
rnpepNP_001002741.2 None
Blue background indicates that the domain is not in the aligned region.

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