DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Psa and erap1b

DIOPT Version :10

Sequence 1:NP_728614.1 Gene:Psa / 38175 FlyBaseID:FBgn0261243 Length:1075 Species:Drosophila melanogaster
Sequence 2:NP_956500.2 Gene:erap1b / 393175 ZFINID:ZDB-GENE-040426-934 Length:963 Species:Danio rerio


Alignment Length:958 Identity:298/958 - (31%)
Similarity:458/958 - (47%) Gaps:156/958 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 RLPTNVVPRHYELLLQPNLKEFTFTGKTVVQVNVKEPTTQITLNALDIVLDSVEL---------- 272
            |||..:.|.||.||:.|||....|||...:|:.|.:.|..|.|::.::.:.|..|          
Zfish    46 RLPDTISPLHYNLLIHPNLTSLDFTGSVQIQIEVLQDTKTIILHSKNLQISSARLLDANIAQQQP 110

  Fly   273 -------HFECSKLKPEKI------VYSAENETATLEFAQEIPAETQGVLHMSFTGELNDKMKGF 324
                   :|:...|..:|.      |||.|                   ||  |...|::...||
Zfish   111 LKVLEYPYFQQIALVSDKALLKRGHVYSVE-------------------LH--FAANLSESFHGF 154

  Fly   325 YRSKYFGPNGEERFAGVTQFEATDARRCFPCWDEPAIKATFDITLVVPKDRVALSNMPVIKEDSL 389
            |:|.|....|:.|....||||||.||..|||:||||.||.|.:.:......:||||||.::...|
Zfish   155 YKSTYRTSKGDVRVVASTQFEATSARAAFPCFDEPAFKANFSVQIRREAKHIALSNMPKLRTLEL 219

  Fly   390 PDGLRRVRFDRTPIMSTYLVAVVVGEYDYVEGKSDDGVLVRVFTPVGKREQGTFALEVATKVLPY 454
            .:||...:||.:..|||||||.:|.::..:...|..||.:.|:....|.:|..|||:.|.|:|.:
Zfish   220 KNGLFEDQFDVSVKMSTYLVAYIVSDFLSISKTSQHGVQISVYAVPEKIDQAEFALDAAVKLLDF 284

  Fly   455 YKDYFNIAYPLPK--------------------MDLIAISDFSAGAMENWGLVTYRETFVLVDPK 499
            |.|||:|.|||||                    :||.||.||.:||||||||.||||:.:|.||.
Zfish   285 YDDYFDIPYPLPKQEKPTIKHAKEEFSVYIICFVDLAAIPDFQSGAMENWGLTTYRESALLFDPH 349

  Fly   500 NTSLMRKQSIALTVGHEIAHQWFGNLVTMEWWTHLWLNEGYASFVEFLCVHHLFPEYDIWTQFVT 564
            .:|...|..|.:.:.||:|||||||||||:||..||||||:|.|:||:.|:...||..:...|:.
Zfish   350 KSSASDKLGITMIIAHELAHQWFGNLVTMQWWNDLWLNEGFAKFMEFVSVNITNPELQVEDYFLG 414

  Fly   565 DMYTRALELDSLKNSHPIEVPVGHPSEIDEIFDEISYNKGASVIRMLHDYIGEDTFRKGMNLYLT 629
            ..: .|:|:|||.:|||:..||.:|::|.|:||::||:|||.::.||.:::....|:.|:..||.
Zfish   415 KCF-EAMEVDSLSSSHPVSTPVENPAQIQEMFDDVSYDKGACILNMLREFLTPKIFKLGIVKYLK 478

  Fly   630 RHQYGNTCTEDLWAAL-------------------------QEASSK-------NVSDVMTSWTQ 662
            .:.|.||...:||.:|                         ...:||       :|..:|.:||.
Zfish   479 HYSYQNTVNSNLWESLTNVCDSDGLDEGRLKGDESCRHSASNTGASKWHSEDELDVKAMMETWTL 543

  Fly   663 HKGFPVVSVESEQTSKNQRLLRLKQCKF-TADGSQADENCLWVVPISVSTSKNPTGIAKTFLLDK 726
            .:|||::::     :...|.:||.|.:: .:|......:.||.||::..||.:.|  ...||| |
Zfish   544 QEGFPLITI-----AVKGREVRLSQERYLKSDDLSQTSSFLWQVPLTYITSDSTT--VHRFLL-K 600

  Fly   727 SSMEVTLDNVDEDDWIKINPGTVGYYRTRYSQEMLEQLMPAVE--KMELPPLDRLGLIDDMFAMV 789
            :..:| |...:|.||||.|....|||...|.....:.|:..::  ...|...||..||::.|.:|
Zfish   601 TKTDV-LYLPEEVDWIKFNVDMSGYYIVHYEGSGWDDLITLLKHNHTALSSNDRASLINNAFQLV 664

  Fly   790 QAGHASTADVLALVDSYRNETNYTVWTAITNSLTNLHILISHTDLME---DFHRFGRNLYEPVAY 851
            ..|.......|.|......||.....|...|.|..|:.|:...|::|   ....:...|::.:..
Zfish   665 SVGKLPLDKALDLTLYLSKETEIMPVTQGFNELVPLYKLMEKRDMVELENQMKGYILQLFQKLIE 729

  Fly   852 RLGWEPRDGENHLDTLLRSLVL---------------TRLVS-FRSSDTIEEAKIRFRRHVNGTE 900
            :..|  .|..:..:.:|||.:|               |:|.: :|.||              |..
Zfish   730 QQLW--TDEGSVSERMLRSYLLLFGCVRGHPPCVSNATQLFNLWRDSD--------------GNM 778

  Fly   901 LLPADLRTTCYK--AVLQDGDEKIFNEMLDLYRATDLHEEQDRISRALGCCGDLKLLRRVIDFAM 963
            .||.|:....:.  |..:||.:.:|.:    |:.:.....:.||.:||........|:.:::.::
Zfish   779 SLPNDVTMAVFSVGARTEDGWDFLFEK----YKESMYVSMKSRIKQALMTSPLDHKLKWMMEQSL 839

  Fly   964 SSE-VRAQDSVFVIVAVAINPKGRDMAWEFFKENNKQLLERYQ-GGFLLSRLIKYLIENFASEER 1026
            ..| ::.||..:|:.:|:.|||....||:|.:.|...|::::. |...::.::..:...:::.|.
Zfish   840 EGELIKTQDLPYVVTSVSRNPKAYKHAWDFLQANWDSLIKKFDLGSHSIAHMVVGVTNQYSTREM 904

  Fly  1027 AKEVEEFLQVNQIP--GCE-RTVSQAVETIRLNAAWLQRDREQLAIFL 1071
            ..||..|..:.| |  |.| |.:.||||.|..|..|:.::...|..:|
Zfish   905 LAEVRNFFSLLQ-PETGAELRCIQQAVENIEENIRWMDKNLPLLKAWL 951

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PsaNP_728614.1 M1_APN-Q_like 227..662 CDD:341064 184/509 (36%)
ERAP1_C 741..1055 CDD:463368 82/341 (24%)
erap1bNP_956500.2 M1_APN-Q_like 54..543 CDD:341064 184/510 (36%)
ERAP1_C 614..934 CDD:463368 81/340 (24%)

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