DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Psa and Trhde

DIOPT Version :9

Sequence 1:NP_728614.1 Gene:Psa / 38175 FlyBaseID:FBgn0261243 Length:1075 Species:Drosophila melanogaster
Sequence 2:NP_666353.2 Gene:Trhde / 237553 MGIID:2384311 Length:1066 Species:Mus musculus


Alignment Length:1065 Identity:311/1065 - (29%)
Similarity:527/1065 - (49%) Gaps:118/1065 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 KQQNPKPSGAADKTTSVKHLFRAESGHLNALI--------------------SSKQFVKVQKQFY 136
            |::..|....|:|::|.   |.|..|..:|.:                    ::::.:.|.|:..
Mouse    21 KKRKKKEEEGAEKSSSP---FAATMGEDDAALRASGRGLSDPWADSVGVRPRTTERHIAVHKRLV 82

  Fly   137 RDFS-------SVSLGAPLKSSDAPLLGDLCSQYRAILA----------HTSADVIPGQDR--HH 182
            ..|:       :|::.|.|.|    |..|.|....|:..          ..|....||..|  ||
Mouse    83 LAFAVSIVALLAVTMLAVLLS----LRFDECGASAAMPGTDGGLGGFPERDSNSSFPGSARRNHH 143

  Fly   183 PGCNYQQIRRAHT---QLLSKEQQLEQERKMAQKAKFERLPTNVVPRHYELLLQPNLKEFTFTGK 244
            .|....|......   ...|.:...|:||:..|.....||..::.|.||.|:|...::.|||:|:
Mouse   144 AGGESSQRESGEVGTPGTPSAQPPSEEEREQWQPWTQLRLSGHLKPLHYNLMLTAFMENFTFSGE 208

  Fly   245 TVVQVNVKEPTTQITLNALDIVLDSVELHFECSKLKPEKIVYSA----------ENETATLEFAQ 299
            ..|::..:..|..:.|:|..:.::.|::        .|...:.|          :.:...:...:
Mouse   209 VNVEIACRNATRYVVLHASRVAVEKVQV--------AEDRAFGAVPVAGFFLYPQTQVLVVVLNR 265

  Fly   300 EIPAETQGVLHMSFTGELNDKMKGFYRSKYFGPNGEERFAGVTQFEATDARRCFPCWDEPAIKAT 364
            .:.|:....|.:.:...:.:::.||:||.|. .:||.||.|||||..|.||:.|||:|||..|||
Mouse   266 TLDAQRHYNLKIIYNALIENELLGFFRSSYV-IHGERRFLGVTQFSPTHARKAFPCFDEPIYKAT 329

  Fly   365 FDITLVVPKDRVALSNMPVIKEDSLPDGLRRVRFDRTPIMSTYLVAVVVGEYDYVEGKSDDGVLV 429
            |.|::......::||||||.......||.....|.:||:||||.:|..:..:.|.|..:..||:|
Mouse   330 FKISIKHQATYLSLSNMPVETSVFEEDGWVTDHFSQTPLMSTYYLAWAICNFTYRETTTKSGVVV 394

  Fly   430 RVFT--PVGKREQGTFALEVATKVLPYYKDYFNIAYPLPKMDLIAISDFSAGAMENWGLVTYRET 492
            |::.  ...:|..|.:||.:..:::.:|:|||.:.|.|||:||:|:......|||||||..:.|.
Mouse   395 RLYARPDAIRRGSGDYALHITKRLIEFYEDYFKVPYSLPKLDLLAVPKHPYAAMENWGLSIFVEQ 459

  Fly   493 FVLVDPKNTSLMRKQSIALTVGHEIAHQWFGNLVTMEWWTHLWLNEGYASFVEFLCVHHLFPEYD 557
            .:|:||..:|:.....:.:.:.|||.|||||:|||..||..:||.||:|.:.||:...:|:|.::
Mouse   460 RILLDPSVSSISYLLDVTMVIVHEICHQWFGDLVTPVWWEDVWLKEGFAHYFEFVGTDYLYPAWN 524

  Fly   558 IWTQ-FVTDMYTRALELDSLKNSHPIEVPVGHPSEIDEIFDEISYNKGASVIRMLHDYIGEDTFR 621
            :..| |:||:....:.||.|.:|||:...|...::||.:||.|:|.|||::||||.:::|...|:
Mouse   525 MEKQRFLTDVLHEVMLLDGLASSHPVSQEVLRATDIDRVFDWIAYKKGAALIRMLANFMGHSVFQ 589

  Fly   622 KGMNLYLTRHQYGNTCTEDLWAALQEASSK-----NVSDVMTSWTQHKGFPVVSVESEQTSKNQR 681
            :|:..|||.|:|||....|||..|.||..:     |:.:||..||...|:||:::....|::|:.
Mouse   590 RGLQDYLTIHKYGNAARNDLWNTLSEALRRNGKYVNIQEVMDQWTLQMGYPVITILGNTTAENRI 654

  Fly   682 LLRLKQCKFTAD-GSQA------DENCLWVVPISVSTSKNPTGIAKTFLL--DKSSMEVTLDNVD 737
            |  :.|..|..| |::.      :.:.||.:|:::... |.:.::...::  ...|....:..:|
Mouse   655 L--ITQQHFIYDIGAKTKALQLQNSSYLWQIPLTIVVG-NRSHVSSEAIIWVSNKSEHHRIAYLD 716

  Fly   738 EDDWIKINPGTVGYYRTRYS----QEMLEQLMPAVEKMELPPLDRLGLIDDMFAMVQAGHASTAD 798
            ...||..|....||:|..|.    :.:::||:...|.:.:.  :|..||||.|::.:||:.....
Mouse   717 RGSWILGNINQTGYFRVNYDLRNWRLLIDQLIRNHEVLSVS--NRAALIDDAFSLARAGYLPQNI 779

  Fly   799 VLALVDSYRNETNYTVWTAITNSLTNLHILISHTDLMEDFHRFGRNLYEPVA---YRLGWEPRDG 860
            .|.::.....|.::..|.|.:.:|..|..|:   |.||:::.|...:.:.||   .:||| ||:.
Mouse   780 PLEIIRYLSEEKDFLPWHAASRALYPLDKLL---DRMENYNIFNEYILKQVATTYIKLGW-PRNN 840

  Fly   861 EN---------HLDTLLRSLVLTRLVSFRSSDTIEEAKIRFRRHVNGT-ELLPADLRTTCYKAVL 915
            .|         |.:  ||..|:....||.:....::|.......::.. ..:|.::|...|...:
Mouse   841 FNGSLVQASYQHEE--LRREVIMLACSFGNKHCHQQASTLISDWISSNRNRIPLNVRDIVYCTGV 903

  Fly   916 QDGDEKIFNEMLDLYRATDLHEEQDRISRALGCCGDLKLLRRVIDFAMSSE-VRAQDSVFVIVAV 979
            ...||.::..:...:.:|....|:..:..||.|..|..||.|:::.:::|| |..||::.||:.|
Mouse   904 SLLDEDVWEFIWMKFHSTTAVSEKKILLEALTCSDDRNLLSRLLNLSLNSEVVLDQDAIDVIIHV 968

  Fly   980 AINPKGRDMAWEFFKENNKQLLERY-QGGFLLSRLIKYLIENFASEERAKEVEEFLQVNQIPG-C 1042
            |.||.|||:||:||::..|.|..|| :..|:.|:||..:.|...:|...||::.|::  ...| .
Mouse   969 ARNPHGRDLAWKFFRDKWKILNTRYGEALFMNSKLISGVTEFLNTEGELKELKNFMK--SYDGVA 1031

  Fly  1043 ERTVSQAVETIRLNAAWLQRDREQL 1067
            ..:.|:||||:..|..|.:..:::|
Mouse  1032 SASFSRAVETVEANVRWKRFYQDEL 1056

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PsaNP_728614.1 Peptidase_M1 218..604 CDD:279741 136/398 (34%)
M1_APN_2 227..667 CDD:189008 162/457 (35%)
ERAP1_C 742..1052 CDD:288671 92/329 (28%)
TrhdeNP_666353.2 M1_APN-Q_like 190..635 CDD:341064 160/453 (35%)
ERAP1_C 720..1044 CDD:378732 95/333 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D110058at2759
OrthoFinder 1 1.000 - - FOG0000044
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X67
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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