DRSC/TRiP Functional Genomics Resources

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Protein Alignment Psa and Rnpep

DIOPT Version :10

Sequence 1:NP_728614.1 Gene:Psa / 38175 FlyBaseID:FBgn0261243 Length:1075 Species:Drosophila melanogaster
Sequence 2:NP_663392.2 Gene:Rnpep / 215615 MGIID:2384902 Length:650 Species:Mus musculus


Alignment Length:541 Identity:122/541 - (22%)
Similarity:196/541 - (36%) Gaps:138/541 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 YSAENETATLEFAQEIPAETQGVLHMSF-TGELNDKMKGFYRSKYFGPN----GEERFAG----- 340
            :|...:...:.|.|...|..:..|.::: .||              ||.    ..|:.||     
Mouse   115 FSHYGQALCVAFRQPCGAADRFELELTYRVGE--------------GPGVCWLAPEQTAGKKKPF 165

  Fly   341 -VTQFEATDARRCFPCWDEPAIKATFDITLVVPKDRVALSNMPVIKEDSLPD-GLRRVRFDRTPI 403
             .||.:|...|..|||:|.||:|.|:...:.||....|     |:..|:... |..:..|..:..
Mouse   166 VYTQGQAVLNRAFFPCFDTPAVKCTYSALIEVPDGFTA-----VMSADTWEKRGPNKFFFQMSHP 225

  Fly   404 MSTYLVAVVVGEYDYVE----------------GKSDDGVLVRVFTPVGKREQGTFALEVATKVL 452
            :.:||:|:.:|:....|                .|.:...::..|...|::..|           
Mouse   226 IPSYLIALAIGDLASAEVGPRSRVWAEPCLIEAAKEEYSGVIEEFLATGEKLFG----------- 279

  Fly   453 PYYKDYFNIAYPLPKMDLIAISDFSAGAMENWGLVTYRETFVLVDPKNTSLMRKQSIALTVGHEI 517
            ||....:::.:..|        .|..|.|||..|     |||    ....|...:|:|..:.|||
Mouse   280 PYVWGRYDLLFMPP--------SFPFGGMENPCL-----TFV----TPCLLAGDRSLADVIIHEI 327

  Fly   518 AHQWFGNLVTMEWWTHLWLNEGYASFVEFLCVHHLFPEYDIWTQFVTDMYT-------RALELDS 575
            :|.|||||||...|...|||||:.          ::.:..|.|......||       |||....
Mouse   328 SHSWFGNLVTNANWGEFWLNEGFT----------MYAQRRISTILFGAAYTCLEAATGRALLRQH 382

  Fly   576 LKNS------HPIEVPVGHPSEIDEIFDEISYNKGASVIRMLHDYIG-EDTFRKGMNLYLTRHQY 633
            :..|      :.:.|.:....:.|:.::|..|.||...:..|...:| :|.|.|.:..|:...::
Mouse   383 MNVSGEENPLNKLRVKIEPGVDPDDTYNETPYEKGYCFVSYLAHLVGDQDQFDKFLKAYVDEFKF 447

  Fly   634 GNTCTEDL----WAALQEASSKNVSDV----MTSWTQHKGFPVVSVESEQTSKNQRLLRLKQCKF 690
            .:...||.    .....|...|.|..:    ...|....|:|....:   .|....|::      
Mouse   448 QSILAEDFLEFYLEYFPELKKKGVDSIPGFEFDRWLNTPGWPPYLPD---LSPGDSLMK------ 503

  Fly   691 TADGSQADENC-LWVV---------PISVSTSKNPTGIAKTFLLDKSSMEVTL--DNVDE--DDW 741
                 .|:|.. |||.         .:::||.|.   ....:.|||...:..|  .||.:  :.:
Mouse   504 -----PAEELAELWVTSEPDMQAIEAVAISTWKT---YQLVYFLDKILQKSPLPPGNVKKLGETY 560

  Fly   742 IKINPGTVGYYRTRYSQEMLE 762
            .||:.......|.|:.|.:|:
Mouse   561 PKISNAQNAELRLRWGQIILK 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PsaNP_728614.1 M1_APN-Q_like 227..662 CDD:341064 98/425 (23%)
ERAP1_C 741..1055 CDD:463368 6/22 (27%)
RnpepNP_663392.2 M1_LTA4H 24..484 CDD:341062 98/425 (23%)
Leuk-A4-hydro_C 530..645 CDD:462686 13/55 (24%)

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