DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Psa and T12E12.6

DIOPT Version :9

Sequence 1:NP_728614.1 Gene:Psa / 38175 FlyBaseID:FBgn0261243 Length:1075 Species:Drosophila melanogaster
Sequence 2:NP_500831.2 Gene:T12E12.6 / 188454 WormBaseID:WBGene00020465 Length:641 Species:Caenorhabditis elegans


Alignment Length:591 Identity:149/591 - (25%)
Similarity:241/591 - (40%) Gaps:104/591 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 PTNVVPRHYELLLQPNLKEFT-FTGKTVVQVNVKEPTTQITLNALDI-----------------V 266
            |.|::|..|:||.:..:.||. |||..|:..|:...:..|||:|:|:                 .
 Worm    19 PHNIIPLSYDLLFKLPIHEFNGFTGSMVLHFNLSSLSDNITLDAVDLHSFRNISLIRSADLTEPT 83

  Fly   267 LDSVELHFECSKLKPEKIVYSAENETATLEFAQEIPAETQGVLHMSFTGELNDKMKGFYRSKYFG 331
            |.|:::..|..:||.||.::..:                    ::...||.|.::         |
 Worm    84 LKSIKILKEKVELKFEKSLFPGQ--------------------YLLTIGEYNGRI---------G 119

  Fly   332 PNGEERFAG------VTQFEATDARRCFPCWDEPAIKATFDITLVVPKDRVALSN---MPVIKED 387
            .:.|..|..      .|..:...|||.|||.|.||:||.|.:::|.|.|.||.||   |.|..|:
 Worm   120 NSSEALFERRNPLLYTTHLQPNHARRLFPCIDHPAVKALFRLSIVHPTDTVAQSNTIAMDVHVEN 184

  Fly   388 SLPDGLRRVRFDRTPIMSTYLVA--VVVGEYDYVEGKSDDGVLVRVFTPVGKREQGTFALEVATK 450
            .   ..:|..|..||::..||||  |:......:..::..||.|||     ..|.....|.|...
 Worm   185 R---KWQRTIFQATPLLPAYLVAFSVMPDSNLQLSRQTSFGVTVRV-----NGESRGLVLRVLDC 241

  Fly   451 VLPYYK---DYFNIAYPLPKMDLIAISDFSAGAMENWGLVTYRETFVLVDPKNTSLMRKQSIALT 512
            .|..::   ...::..||.|:|.|.:.::. |.|||||.:|..||..      ||......|.| 
 Worm   242 ALASFEILAGLIDVPLPLNKIDFILVPEYD-GGMENWGHITVSETLA------TSGDDAHLIYL- 298

  Fly   513 VGHEIAHQWFGNLVTMEWWTHLWLNEGYASFVEFLCVHHLFPEYDIWTQFVTDMYTR-ALELDSL 576
            :.|||||.|.||..|::.|..:.|.|....::....|..|..:.....:|....|.. .|..|.|
 Worm   299 IAHEIAHHWIGNRATIDSWNWICLQEDLTDWMALKAVKALLTDEIRLQRFQLAQYVEIQLVEDFL 363

  Fly   577 KNSHPIEVPVGHPSEID-EIFDEISYNKGASVIRMLHDYIGEDTFRKGMNLYLTRHQ-YGNTCTE 639
            ...|.:.:    ||:|: |:.:...|.||..::..|...:||......:...:..|. |..|...
 Worm   364 SPGHSLYM----PSKINQELINRHCYLKGVVLLDTLESVVGEQFMYSVIKSLVGSHSTYNLTTFT 424

  Fly   640 DLWAALQEASSKNVSDVMTSWTQHKGFPVVSVESEQTSKNQRLLRLKQCKFTADGSQADENCLWV 704
            ..:..::...:..|..:...|....|:|.:.||:...|.     ||:|.          ...||.
 Worm   425 SYFDQIRVDRNATVGQIYEYWYTTGGYPSILVENNGPSS-----RLQQL----------SRPLWP 474

  Fly   705 VPISVSTSKNPTGIAKTFLLDKSSMEVTLDNVDEDDWIKINPGTVGYYRTRYSQEMLE--QLMPA 767
            :.:: ||...|..:....::..|.....|.|::...::::|..::.:  |...:.|.|  :|..|
 Worm   475 LKMT-STLAIPQFVFSESIVFASENAPLLVNLNFTSFMRVNYDSLTW--TAIFKYMFEEPELFSA 536

  Fly   768 VEKMEL 773
            |.:.:|
 Worm   537 VGRAQL 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PsaNP_728614.1 Peptidase_M1 218..604 CDD:279741 115/417 (28%)
M1_APN_2 227..667 CDD:189008 123/474 (26%)
ERAP1_C 742..1052 CDD:288671 8/34 (24%)
T12E12.6NP_500831.2 GluZincin 25..402 CDD:387391 116/425 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0308
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1087
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D110058at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.770

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