DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Psa and lvrn

DIOPT Version :10

Sequence 1:NP_728614.1 Gene:Psa / 38175 FlyBaseID:FBgn0261243 Length:1075 Species:Drosophila melanogaster
Sequence 2:XP_031748993.1 Gene:lvrn / 100496094 XenbaseID:XB-GENE-980447 Length:990 Species:Xenopus tropicalis


Alignment Length:962 Identity:264/962 - (27%)
Similarity:446/962 - (46%) Gaps:152/962 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 RLPTNVVPRHYELLLQPNLKE-----FTFTGKTVVQVNVKEPTTQITLNALDIVLDSVELHFECS 277
            |||.|:||.||:|.|.|.::|     :.|:|:..:.::..|.|..:.|:::.:....|.|..   
 Frog    71 RLPHNLVPLHYDLELWPRMEEDEEGNYPFSGQVNITISCVEDTDVVLLHSIQLNFSDVGLRL--- 132

  Fly   278 KLKPEKIVYSA----------------------------------------ENETATLEFAQEIP 302
             |..:.|:|.:                                        ::....||..:.:.
 Frog   133 -LGNKTIMYQSMEKDGKHNALQEGRAYKRLQDPTYDIHGGNVSINNVWTFEDHSYVVLELNERLV 196

  Fly   303 AETQGVLHMSFTGELNDKMKGFYRSKYFGPNGEERFAGVTQFEATDARRCFPCWDEPAIKATFDI 367
            |....:|.:::||.:......|.  .::.....::....:..|...||..:||:||||:||||.|
 Frog   197 AGNLYLLELNYTGFIRQNTALFI--THYKDFNIDKAVVASLLEPEYARAVYPCFDEPALKATFKI 259

  Fly   368 TLVVPKDRVALSNMPVI----KEDSLPDG--LRRVRFDRTPIMSTYLVAVVVGEYDYVEGKSDDG 426
            .||.....|||||||.:    :||.  ||  .....||.||.||||:.|.|:.::||| ..::.|
 Frog   260 RLVHNSSYVALSNMPAVAVSEREDI--DGSIWTVTTFDTTPKMSTYITAFVICDFDYV-NITERG 321

  Fly   427 VLVRVFT--PVGKREQGTFALEVATKVLPYYKDYFNIAYPLPKMDLIAISDFSAGAMENWGLVTY 489
            ..:||:.  .|.::...:.||.:|..:|.|.:|.||::|||.|.|.:|:.|....|||||||:|:
 Frog   322 NEIRVWARKEVVQKGFASLALSIAGPLLSYMEDLFNVSYPLQKTDFVALPDLDVEAMENWGLITF 386

  Fly   490 RETFVLVDPKNTSLMRKQSIALTVGHEIAHQWFGNLVTMEWWTHLWLNEGYASFVEF-------- 546
            .|..::.||:..|...|...:|.|.||||||||||||||:|||.||||||:|:::|:        
 Frog   387 IEEALIYDPRQKSSNSKFRTSLIVSHEIAHQWFGNLVTMKWWTDLWLNEGFATYMEYFGITFLDS 451

  Fly   547 -LCVHHLFPEYDIWTQFVTDMYTRALELDSLKNSHPIEVPVGHPSEIDEIFDEISYNKGASVIRM 610
             |.::.||..:::...|..|:...|..: |:|.....|....|      :|:|.:|:||::::||
 Frog   452 KLELNELFTMHNLQPIFERDVGAHAKTV-SMKEEELYEADSSH------MFNEFTYDKGSALVRM 509

  Fly   611 LHDYIGEDTFRKGMNLYLTRHQYGNTCTEDLWAALQ--------EASSKNVSDVMTSWTQHKGFP 667
            |..::.|..|.||::.||....:.|...:|||..||        ......:..:|.|||..:|.|
 Frog   510 LSSFLTEKLFIKGISSYLKTFSFSNVDQDDLWNHLQMFIDHQDEVRLPTTLRHIMQSWTWQRGIP 574

  Fly   668 VVSVESEQTSKNQRLLRLKQCKFTADGSQADENCLWVVPISVSTSKNPTGIAKTFLLDKSSMEVT 732
            ::::::......:.|.:..    ..|...:|.|..|:||  |:..||.|.....:|..||.:...
 Frog   575 LLTLDTTTGELAEELFKTD----NTDNITSDSNHTWIVP--VTWMKNGTKQISLWLDSKSKVFPV 633

  Fly   733 LDNVDEDDWIKINPGTVGYYRTRYSQEMLEQLMPAVE--KMELPPLDRLGLIDDMFAMVQAGHAS 795
            |... .|:||.:|....|||||.|::|...:|...:|  ...:|.::|:.||:|.|.:.:.|:..
 Frog   634 LTTA-ADEWIVLNINVTGYYRTNYNKENWNRLAKQLEANPKVVPTVNRIQLIEDAFILARYGYTD 697

  Fly   796 TADVLALVDSYRNETNYTVWTAITNSLTNL-HILISHTDLMEDFHRFGRNLYEPVAYRLGWEPRD 859
            ....|:|......|....||..:...:|:. :.||::|: ...|.::......|:..|.....|.
 Frog   698 HGTALSLTKYLEKEEEINVWYTVLKHVTSSDYPLITYTN-FPLFKKYILKRISPIYQRFANSIRR 761

  Fly   860 G----------ENHLDTLLRSLVLTRLVSFRSSDTIEEAK---IRFRRHVNGTELLPADLRT--T 909
            .          :.|::     |:|....||...|.::.|.   ..:.::.:| .::|..:|.  .
 Frog   762 NFDEAADDYFIQVHIE-----LILKTACSFGLQDCLQLAHQLYATWMKNCSG-NVIPESIRNPIC 820

  Fly   910 CYKAVLQDGDE------KIFNEMLDLYRATDLHEEQDRISRALGCCGDLKLLRRVIDFAMSSEVR 968
            || |:...|::      |:.|:..::        |:|.:..||.|..:..||.|.:::::  |:.
 Frog   821 CY-AIANGGEKEWEFAWKMVNKSEEI--------ERDLLFYALSCTKEPWLLHRYLEYSL--EMY 874

  Fly   969 AQDSVFVIVAVAINPKGRDMAWEFFKENNKQLLERYQGGFLLSRLIKYLIENFASEERA----KE 1029
            ...:..:.:.|..|..||.:||||.|||.:::.:.: |..........|:..|||:..:    :|
 Frog   875 KSSAFTIFLDVIKNEIGRHIAWEFLKENWQRIHDIF-GPRDTVDFYTVLLPTFASKAASDLQFQE 938

  Fly  1030 VEEFLQVNQIPGCERTVSQAVE---------TIRLN---AAWLQRDREQLAI 1069
            ::.|:...........:.:.||         |.::|   ..||||:.::..|
 Frog   939 IQLFINTTINENQRERILEQVENKWRKSLGWTSKINDEILTWLQRNADEAEI 990

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PsaNP_728614.1 M1_APN-Q_like 227..662 CDD:341064 155/504 (31%)
ERAP1_C 741..1055 CDD:463368 78/350 (22%)
lvrnXP_031748993.1 M1_APN-Q_like 79..568 CDD:341064 154/504 (31%)
ERAP1_C 641..945 CDD:463368 75/322 (23%)

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