DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Psa and trhde

DIOPT Version :10

Sequence 1:NP_728614.1 Gene:Psa / 38175 FlyBaseID:FBgn0261243 Length:1075 Species:Drosophila melanogaster
Sequence 2:XP_002939988.3 Gene:trhde / 100489066 XenbaseID:XB-GENE-1013649 Length:1020 Species:Xenopus tropicalis


Alignment Length:893 Identity:274/893 - (30%)
Similarity:474/893 - (53%) Gaps:50/893 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 RLPTNVVPRHYELLLQPNLKEFTFTGKTVVQVNVKEPTTQITLNALDIVLDSVELHFE--CSKLK 280
            ||||::.|.||.|::...:..|||.|:..|::.....:..|.::|..:.::.|::..:  ..::|
 Frog   135 RLPTHLRPLHYNLMVTAFMNNFTFCGEVNVEIECLNSSRYIVVHAHRLTVERVQVAEDRVAGEVK 199

  Fly   281 PEKIVYSAENETATLEFAQEIPAETQGVLHMSFTGELNDKMKGFYRSKYFGPNGEERFAGVTQFE 345
            ........:|:...:...:.:.|:....|.:.::..:.:::.||:||.|. .:||.|...||||.
 Frog   200 VSHYFPYPQNQVLVVVLNRSLEAQKSYNLKIIYSAIIENELLGFFRSSYV-LHGERRSLAVTQFS 263

  Fly   346 ATDARRCFPCWDEPAIKATFDITLVVPKDRVALSNMPVIKEDSLPDGLRRVRFDRTPIMSTYLVA 410
            ...||:.|||:|||..||||.|::......::||||||........|.....|.:||:||||.:|
 Frog   264 PIHARKAFPCFDEPIYKATFKISIRHQTSYLSLSNMPVETSVFEEGGWVTDHFSQTPLMSTYYLA 328

  Fly   411 VVVGEYDYVEGKSDDGVLVRVFT--PVGKREQGTFALEVATKVLPYYKDYFNIAYPLPKMDLIAI 473
            ..|..:.:.|..:..||:||::.  ...:|..|.:||.:..::|.:|:|||.:.|.|||:||:|:
 Frog   329 WAVCNFTFKEAVTQSGVVVRLYARPDAIRRGSGDYALNITKRLLEFYEDYFRVPYSLPKLDLLAV 393

  Fly   474 SDFSAGAMENWGLVTYRETFVLVDPKNTSLMRKQSIALTVGHEIAHQWFGNLVTMEWWTHLWLNE 538
            ......|||||||..:.|..:|:||..:|:.....:.:.:.|||.|||||:|||..||..:||.|
 Frog   394 PKHPYAAMENWGLSVFVEQRILLDPSISSISYLLDVTMVIVHEICHQWFGDLVTPIWWEDVWLKE 458

  Fly   539 GYASFVEFLCVHHLFPEYDIWTQ-FVTDMYTRALELDSLKNSHPIEVPVGHPSEIDEIFDEISYN 602
            |.|.:.||:...:|:|.:::..| |:||:....:.||.|.:|||:...|...::||.:||.|:|.
 Frog   459 GLAHYFEFVGTDYLYPGWNMEKQRFLTDVLHEVMLLDGLASSHPVSQEVLKATDIDRVFDWIAYK 523

  Fly   603 KGASVIRMLHDYIGEDTFRKGMNLYLTRHQYGNTCTEDLWAAL-----QEASSKNVSDVMTSWTQ 662
            |||::||||.:::|...|::|:..|||.|:|||....|||..|     .|....|:.:||..||.
 Frog   524 KGAALIRMLANFMGHKVFQRGLQDYLTTHKYGNAARNDLWNTLTKVLKNEGKLLNIREVMDQWTL 588

  Fly   663 HKGFPVVSVESEQTSKNQRLLRLKQCKF-------TADGSQADENCLWVVPISVSTSK----NPT 716
            ..|:||:::....|:.:  ::.:.|..|       |.|....:::.||.:|::::...    :|.
 Frog   589 QMGYPVITILRNDTTDD--IITITQEHFLYNIDKRTRDKEFRNKSSLWQIPLTIAVGNTSHISPQ 651

  Fly   717 GIAKTFLLDKSSMEVTLDNVDEDDWIKINPGTVGYYRTRYS----QEMLEQLMPAVEKMELPPLD 777
            .|  .::.:||... .:.::||.:|:..|...:||:|..|.    :.:.:|||...|.:.:.  :
 Frog   652 AI--IWVSNKSEYH-RIPSLDESNWVLGNLDQIGYFRVNYDVRNWRLLTDQLMRNSEVISVS--N 711

  Fly   778 RLGLIDDMFAMVQAGHASTADVLALVDSYRNETNYTVWTAITNSLTNLHILISHTDLMEDFHRFG 842
            |..||||.|.:.:||:.:....|.::.....|.::..|.|.:.:|..|..|:..|   ||:..|.
 Frog   712 RAALIDDAFNLARAGYLTQNIPLEIIRYLSEEKDFLPWHAASRALYPLDKLLDRT---EDYSIFS 773

  Fly   843 RNLYEPVA---YRLGWEPRDGEN-------HLDTLLRSLVLTRLVSFRSSDTIEEAKIRFRRHVN 897
            ..:.:.|:   :|||| |.:|:|       :....||..|:....||.:....::|.......::
 Frog   774 EYILKQVSTMYFRLGW-PTNGQNGSAVPTSYQTEELRREVIMLACSFGNKQCHQKAATMISDWIS 837

  Fly   898 GT-ELLPADLRTTCYKAVLQDGDEKIFNEMLDLYRATDLHEEQDRISRALGCCGDLKLLRRVIDF 961
            .. ..:|.::|...|...:...||.::..:...:.::....|:..:..||.|..:..||.|:::.
 Frog   838 SNRNRIPPNVRDIVYCTGVSLMDEDVWEFIWMKFHSSTAVSEKKILLEALTCSDNRNLLNRLLNL 902

  Fly   962 AMSSE-VRAQDSVFVIVAVAINPKGRDMAWEFFKENNKQLLERY-QGGFLLSRLIKYLIENFASE 1024
            :::|| |..||::.||:.||.||.|||:||:||::..|.|..|| :..|:.|:||..:.|...:|
 Frog   903 SLNSEVVLDQDAIDVIIHVARNPHGRDLAWKFFRDKWKILNARYGEALFMNSKLISGVTEFLNTE 967

  Fly  1025 ERAKEVEEFLQVNQIPGCERTVSQAVETIRLNAAWLQRDREQLAIFLR 1072
            |...|:::|:|.::......::|:|.||:..|..|....|::|..:||
 Frog   968 EELNELKDFIQQHKGGSAVASLSRATETVDANVRWQHLYRDELFQWLR 1015

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PsaNP_728614.1 M1_APN-Q_like 227..662 CDD:341064 154/444 (35%)
ERAP1_C 741..1055 CDD:463368 91/330 (28%)
trhdeXP_002939988.3 M1_APN-Q_like 143..588 CDD:341064 154/445 (35%)
ERAP1_C 673..998 CDD:463368 91/330 (28%)

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