| Sequence 1: | NP_612113.2 | Gene: | cue / 38174 | FlyBaseID: | FBgn0011204 | Length: | 644 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038948896.1 | Gene: | Lrp3 / 89787 | RGDID: | 619729 | Length: | 810 | Species: | Rattus norvegicus |
| Alignment Length: | 274 | Identity: | 61/274 - (22%) |
|---|---|---|---|
| Similarity: | 94/274 - (34%) | Gaps: | 93/274 - (33%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 334 DHHCASIVRKVKERVDEQSRK-----FEIRSLLDQKIKVLE-----DERCMNDGEYRAATDLCIC 388
Fly 389 PTGFKGSRCEIRECHN----YCVHG---TCQMSELAYPKCYCQP-------------GFKGER-C 432
Fly 433 --ELSVCSGLCLNGGHCRVSKDENEAPSC---ECPAKFGGARCEQNSTEICSLFCRLLKHEPEMY 492
Fly 493 VPFGCHS-----------IC---------EELAQDNSTNIAIPQYQHLEVCLTPR-VWTSSVIII 536
Fly 537 LVVGIVSSLLLVAV 550 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| cue | NP_612113.2 | LY | 101..141 | CDD:214531 | |
| Ldl_recept_b | 167..208 | CDD:278487 | |||
| LY | 193..237 | CDD:214531 | |||
| Lrp3 | XP_038948896.1 | CUB | 43..156 | CDD:238001 | |
| LDLa | 166..200 | CDD:238060 | |||
| LDLa | 212..249 | CDD:238060 | |||
| CUB | 254..364 | CDD:238001 | 18/95 (19%) | ||
| LDLa | 416..452 | CDD:238060 | 7/40 (18%) | ||
| LDLa | 455..489 | CDD:238060 | 6/40 (15%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||