DRSC/TRiP Functional Genomics Resources

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Protein Alignment cue and NID1

DIOPT Version :10

Sequence 1:NP_612113.2 Gene:cue / 38174 FlyBaseID:FBgn0011204 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_002499.2 Gene:NID1 / 4811 HGNCID:7821 Length:1247 Species:Homo sapiens


Alignment Length:370 Identity:98/370 - (26%)
Similarity:147/370 - (39%) Gaps:118/370 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 KRDLIAANHVAEQTIARTGNESVGGLAYDPLNMNLFWSDTEQRKIFFAPIHGSATPQVLV--DLS 151
            |.:..|..||..:.|.        |||:|.::..::|:|..:..|..|.:|| ..|..::  || 
Human   966 KTEAKAFLHVPAKVII--------GLAFDCVDKMVYWTDITEPSIGRASLHG-GEPTTIIRQDL- 1020

  Fly   152 AEGGRPDGVAVDVCRRKLYWTNSNVTHPTVERINLDGSNRTVIISSNIDMPRGIVVDQLSDRLFW 216
               |.|:|:|||...|.::||:||:..  :|...|||:.|.|:..:::..|||||.|.:...|:|
Human  1021 ---GSPEGIAVDHLGRNIFWTDSNLDR--IEVAKLDGTQRRVLFETDLVNPRGIVTDSVRGNLYW 1080

  Fly   217 ID---DLKGVFFSVESSKLDGSDRQVVLKDKHHEPLNLAVTNDA----IYWTDR-TTRAVWSHPK 273
            .|   |..    .:|:|.:||::|:::::|....|..|  |.||    :.|.|. |.||...:|.
Human  1081 TDWNRDNP----KIETSYMDGTNRRILVQDDLGLPNGL--TFDAFSSQLCWVDAGTNRAECLNPS 1139

  Fly   274 VP-----------VIKVTTTSKPDEEDSTDSTDFKDPEPVAEDCPLVRVANLSEEARGIVARTGF 327
            .|           ...||:..|     :...||:|....||.|..      :|:|       |..
Human  1140 QPSRRKALEGLQYPFAVTSYGK-----NLYFTDWKMNSVVALDLA------ISKE-------TDA 1186

  Fly   328 YQRLQKDHHCASIVRKVKERVDEQSRKFEIRSLLDQKIKVLEDERCMNDGEYRAATDLCICPTGF 392
            :|    .|              :|:|.:.|.:.|.|                        ||.| 
Human  1187 FQ----PH--------------KQTRLYGITTALSQ------------------------CPQG- 1208

  Fly   393 KGSRCEIRECHNYCV--HGTCQMSELAYP---KCYCQPGFKGERC 432
                      ||||.  :|.|....||.|   .|.|.....|..|
Human  1209 ----------HNYCSVNNGGCTHLCLATPGSRTCRCPDNTLGVDC 1243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cueNP_612113.2 TerD_like 48..>85 CDD:473128
YvrE <73..>164 CDD:442613 23/76 (30%)
LY 101..141 CDD:214531 10/39 (26%)
Ldl_recept_b 167..208 CDD:459654 16/40 (40%)
LY 193..237 CDD:214531 15/46 (33%)
NID1NP_002499.2 NIDO 106..269 CDD:214712
EGF_3 390..425 CDD:463759
nidG2 429..660 CDD:238158
EGF_3 672..708 CDD:463759
Cell attachment site 702..704
EGF_CA 710..751 CDD:214542
EGF_3 762..800 CDD:463759
EGF_3 811..839 CDD:463759
Thyroglobulin_1 849..919 CDD:459665
Vgb 934..1177 CDD:443399 71/236 (30%)
LDL-receptor class B 1 990..1032 15/46 (33%)
LY 1014..1055 CDD:214531 17/46 (37%)
LDL-receptor class B 2 1033..1075 17/43 (40%)
LY 1056..1100 CDD:214531 15/47 (32%)
LDL-receptor class B 3 1076..1120 15/49 (31%)
LDL-receptor class B 4 1121..1162 10/45 (22%)
FXa_inhibition 1212..>1236 CDD:464251 8/23 (35%)
Blue background indicates that the domain is not in the aligned region.

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