| Sequence 1: | NP_612113.2 | Gene: | cue / 38174 | FlyBaseID: | FBgn0011204 | Length: | 644 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001019878.1 | Gene: | Lrp3 / 435965 | MGIID: | 3584516 | Length: | 790 | Species: | Mus musculus |
| Alignment Length: | 308 | Identity: | 61/308 - (19%) |
|---|---|---|---|
| Similarity: | 104/308 - (33%) | Gaps: | 106/308 - (34%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 334 DHHCASIVRKVKERVDEQSRK-----FEIRSLLDQKIKVLE-----DERCMNDGEYRAATDLCIC 388
Fly 389 PTGFKGSRCEIRECHN------------------YCV--HGTCQMSE-----LAYPKCYCQPGFK 428
Fly 429 GERCELSVCSGLCLNGGHCRVSKDENEAPSC---ECPAKFGGARCEQNSTEICSLFCRLLKHEPE 490
Fly 491 MYVPFGCHS-----------IC---------EELAQDNSTNIAIPQYQHLEVCLTPR-VWTSSVI 534
Fly 535 IILVVGIVSSLLLVAV----IVQGIR----RLYKPKRPRIRKTFVVRK 574 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| cue | NP_612113.2 | LY | 101..141 | CDD:214531 | |
| Ldl_recept_b | 167..208 | CDD:278487 | |||
| LY | 193..237 | CDD:214531 | |||
| Lrp3 | NP_001019878.1 | CUB | 64..177 | CDD:238001 | |
| LDLa | 187..221 | CDD:238060 | |||
| LDLa | 233..270 | CDD:238060 | |||
| CUB | 275..385 | CDD:238001 | 15/95 (16%) | ||
| LDLa | 436..472 | CDD:238060 | 7/40 (18%) | ||
| LDLa | 475..509 | CDD:238060 | 6/40 (15%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||