DRSC/TRiP Functional Genomics Resources

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Protein Alignment cue and LRP3

DIOPT Version :10

Sequence 1:NP_612113.2 Gene:cue / 38174 FlyBaseID:FBgn0011204 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_005259002.1 Gene:LRP3 / 4037 HGNCID:6695 Length:785 Species:Homo sapiens


Alignment Length:329 Identity:69/329 - (20%)
Similarity:107/329 - (32%) Gaps:110/329 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   334 DHHCASIVRKVKERVDEQ-SRK----FEIRSLLDQKIKVLE-----DERCMNDGEYRAATDLCIC 388
            |.||..:       ||.| ||:    .|:|...|..::|.|     .:|.:....||:...    
Human   279 DLHCTWL-------VDTQDSRRVLLQLELRLGYDDYVQVYEGLGERGDRLLQTLSYRSNHR---- 332

  Fly   389 PTGFKGSRCEIRECHN-------------YCVHGTCQMSE-------------LAYPKCYCQPGF 427
            |...:.::..:...::             |.|.|.|...|             |....|:.:|  
Human   333 PVSLEAAQGRLTVAYHARARSAGHGFNATYQVKGYCLPWEQPCGSSSDSDGGSLGDQGCFSEP-- 395

  Fly   428 KGERCELSVCSGLCLNGGHCRVSKDENEAPSC---ECPAKFGGARCEQNSTEICSLFCRLLKHEP 489
              :||:         ...||...:||...|:|   :.|.:.|...|...:..     |...|..|
Human   396 --QRCD---------GWWHCASGRDEQGCPACPPDQYPCEGGSGLCYTPADR-----CNNQKSCP 444

  Fly   490 EMYVPFGCHS-----------IC---------EELAQDNSTNIAIPQYQHLEVCLTPR-VWTSSV 533
            :......|.|           :|         :|..||.|.       :|..:...|| |.|:::
Human   445 DGADEKNCFSCQPGTFHCGTNLCIFETWRCDGQEDCQDGSD-------EHGCLAAVPRKVITAAL 502

  Fly   534 IIILVVGIVSSLLLVAVIVQGIR-RLYKPKRPRIRKTFVVRKQARTNSAGDTPLTNRPLATEQCE 597
            |..||.|      |:.||..|.. :||.      .:|...|.:| ..|....|..:|...|:...
Human   503 IGSLVCG------LLLVIALGCAFKLYS------LRTQEYRSRA-AQSCRPPPTASRAFETQMTR 554

  Fly   598 ITIE 601
            :..|
Human   555 LEAE 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cueNP_612113.2 TerD_like 48..>85 CDD:473128
YvrE <73..>164 CDD:442613
LY 101..141 CDD:214531
Ldl_recept_b 167..208 CDD:459654
LY 193..237 CDD:214531
LRP3XP_005259002.1 CUB 43..156 CDD:238001
LDLa 166..200 CDD:238060
LDLa 212..249 CDD:238060
CUB 254..364 CDD:238001 18/95 (19%)
LDLa 416..452 CDD:238060 7/40 (18%)
LDLa 455..489 CDD:238060 6/40 (15%)
PHA03247 <527..772 CDD:223021 8/33 (24%)
Blue background indicates that the domain is not in the aligned region.

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