Sequence 1: | NP_612113.2 | Gene: | cue / 38174 | FlyBaseID: | FBgn0011204 | Length: | 644 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260800.2 | Gene: | LRP1 / 35799 | FlyBaseID: | FBgn0053087 | Length: | 4752 | Species: | Drosophila melanogaster |
Alignment Length: | 856 | Identity: | 173/856 - (20%) |
---|---|---|---|
Similarity: | 287/856 - (33%) | Gaps: | 278/856 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 VLLLATCLLTPAHGTPLEWDFAVTLRTKIQFMDSSWQTIATAAHEFDELSALTFD----ESEELI 73
Fly 74 YFNDLKHRNGSIFSLKRDLIAANHVAEQTIARTGN-------------ESVGGLAYDPLNMNLFW 125
Fly 126 SDTEQRKIFFAPIHGSATPQVLVDLSAEGGRPDGVAVDVCRRKLYWTNSNVTHPTVER----INL 186
Fly 187 DGSNRTVIISSNIDMPRGIVVDQLSDRLFWIDDLKGVFFSVESSKLDGSDRQVVLKDKHHE-PLN 250
Fly 251 LAVTNDAIY--------------WTDRTTRAVWSHPKV------PVIKVTTTSKPDEED------ 289
Fly 290 ----------------------STDSTDFKDPEPVAEDCPL---VRVANLSEEARGIVARTGFYQ 329
Fly 330 RLQKDHHCASIVRKV---------------------------KERVDE-----QSRKFEIRSLLD 362
Fly 363 QKI--------KVLEDER--------CMNDG---EYRAATDLCICPTGFKGSRCEIRECHNYCVH 408
Fly 409 -GTCQMSELAYPKCYCQPGFKGERCELSVCSGLCLNGGHCRVSKDENEAPSCECPAKFGGARCEQ 472
Fly 473 ------------NSTEI-----CSLF-------CRLLK--------------------------- 486
Fly 487 ---------HEPEMYVPFGCHSI------------------CEELAQDNSTNIAIPQYQHLEVCL 524
Fly 525 TPRV---------WTSSVIIILVVGIVSSLLLVAVIVQGIRRLYKPKRPRIRKTFVVRKQARTNS 580
Fly 581 AGDTPLTN---RPLATEQCEITIE----NCCNMNICETPCFD-------PKLVEQTLSKSSCKED 631
Fly 632 KKILIHNMEDD 642 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cue | NP_612113.2 | LY | 101..141 | CDD:214531 | 8/52 (15%) |
Ldl_recept_b | 167..208 | CDD:278487 | 10/44 (23%) | ||
LY | 193..237 | CDD:214531 | 11/43 (26%) | ||
LRP1 | NP_001260800.2 | LDLa | 87..118 | CDD:197566 | |
LDLa | 126..163 | CDD:238060 | |||
EGF_CA | 246..283 | CDD:214542 | |||
Ldl_recept_b | 449..487 | CDD:278487 | |||
LY | 472..513 | CDD:214531 | |||
LY | 817..852 | CDD:214531 | |||
LDLa | 1057..1092 | CDD:197566 | |||
LDLa | 1104..1134 | CDD:238060 | |||
FXa_inhibition | 1289..1317 | CDD:291342 | |||
LY | 1434..1476 | CDD:214531 | |||
LY | 1477..1521 | CDD:214531 | |||
LY | 1533..1567 | CDD:214531 | |||
LY | 1568..1611 | CDD:214531 | |||
FXa_inhibition | 1639..1676 | CDD:291342 | |||
LY | 1794..1838 | CDD:214531 | |||
LY | 2078..2112 | CDD:214531 | |||
NHL | <2082..>2152 | CDD:302697 | |||
NHL repeat | 2082..2120 | CDD:271320 | |||
FXa_inhibition | 2269..2303 | CDD:291342 | |||
LY | 2430..2471 | CDD:214531 | |||
LY | 2475..2517 | CDD:214531 | |||
LDLa | 2630..2661 | CDD:238060 | |||
LDLa | 2671..2702 | CDD:238060 | |||
LDLa | 2727..2759 | CDD:238060 | |||
LDLa | 2773..2802 | CDD:238060 | |||
LDLa | 2810..2844 | CDD:238060 | |||
LDLa | 2848..2878 | CDD:238060 | |||
LDLa | 2887..2916 | CDD:197566 | |||
LDLa | 2938..2969 | CDD:197566 | |||
LDLa | 2989..3015 | CDD:197566 | |||
LDLa | 3030..3061 | CDD:238060 | |||
EGF_CA | 3062..>3091 | CDD:214542 | |||
EGF_CA | 3103..3141 | CDD:214542 | |||
LY | 3212..3254 | CDD:214531 | |||
LY | 3255..3297 | CDD:214531 | |||
LY | 3299..3340 | CDD:214531 | |||
LY | 3354..3389 | CDD:214531 | |||
LDLa | 3458..3490 | CDD:238060 | |||
LDLa | 3499..3533 | CDD:238060 | |||
LDLa | 3582..3616 | CDD:238060 | |||
LDLa | 3621..3652 | CDD:197566 | |||
LDLa | 3663..3697 | CDD:238060 | |||
LDLa | 3702..3736 | CDD:238060 | |||
LDLa | 3776..3808 | CDD:197566 | |||
LDLa | 3818..3849 | CDD:197566 | |||
LDLa | 3860..3894 | CDD:238060 | |||
NHL | 4029..>4158 | CDD:302697 | 34/142 (24%) | ||
NHL repeat | 4034..4074 | CDD:271320 | 8/43 (19%) | ||
NHL repeat | 4076..4115 | CDD:271320 | 10/45 (22%) | ||
LY | 4108..4150 | CDD:214531 | 11/44 (25%) | ||
NHL repeat | 4121..4158 | CDD:271320 | 14/39 (36%) | ||
EGF_CA | <4386..4414 | CDD:238011 | 12/27 (44%) | ||
EGF_CA | 4415..4450 | CDD:238011 | 12/34 (35%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45461681 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |