Protein Alignment cue and CG6739

DIOPT Version :10

• Sequence 1: NP_612113.2
• Gene: cue / 38174
• FlyBaseID: FBgn0011204
• Length: 644
• Species: Drosophila melanogaster
• Sequence 2: NP_609130.1
• Gene: CG6739 / 34037
• FlyBaseID: FBgn0031926
• Length: 787
• Species: Drosophila melanogaster
• Alignment Length: 595
• Identity: 99/595 - (16%)
• Similarity: 181/595 - (30%)
• Gaps: 217/595 - (36%)

  Fly    78 LKHRNGSIFSLKRDLIAANHVAEQTIARTGNESVGG----LAYDPLNMNLFWSDTEQRKIFFAPI 138
            :.:...|:..|:|......|....|:....:::.|.    ..|...:.:..||.|::..|...
  Fly    10 IANETSSVTGLRRQPTKYPHGLNITVQTIDDDNEGSPKDHSDYTRASGDSCWSKTQKYHIGML-- 72

  Fly   139 HGSATPQVLVD---------------LSAEGGRPD--------GVAVDVCRRK-LYWTNSNVTHP 179
               .:|:.|.:               |:::..||:        |.|..|||.| |.|
  Fly    73 ---GSPETLAELQVRRYKYPLTANYYLNSKLERPEKPTPWMLLGYARSVCRWKYLRW-------- 126

  Fly   180 TVERINLDGSNRTVIISSNIDMPRGIVVDQLSDRLFWIDDLKGVFFSVESSKLDGSDRQVVLKDK 244
                        .:|..:::.:..|::...|     |:.|:     ||..:|.        |:.:
  Fly   127 ------------PIIFVASVLLFFGLITYCL-----WLHDV-----SVARAKF--------LQRR 161

  Fly   245 HHEPLNLAVTNDAIYWTDRTTRAVWSHPKVPVIKVTTTSKPDEEDSTDST--------DFKDPEP 301
            :...|....::....|.:.||.:....|:      .||...|.:||.:||        |..|||.
  Fly   162 YEATLTSTSSSSNEVWDEETTSSTERSPQ------ETTRLEDMDDSDESTELPEIAFGDDGDPEA 220

  Fly   302 VAED-----------CPLVRVANLSEEARGIVARTGFYQRLQKDHHCASIVRKVKER-------- 347
            ..||           ...:|..:..:.:.|:        .:::|.....:::::..:
  Fly   221 GGEDGDGDYDDTLLPADSIRFTSGHQNSFGV--------PIEQDKRMLQLLKELLHKPQATPAGN 277

  Fly   348 --------------VDEQSRKFEIRSL---------------------LDQKIKVLEDERCMNDG 377
                          :....|..|..:|                     ||..:....:.....|.
  Fly   278 EPTLTRVSPTLPPPLSASGRPTEAMALTTPSTTNSGCQSTMLPMCQGVLDYDLTFNREGAAPRDA 342

  Fly   378 EYRAATDLCICPTGFKGSRCEIR----------------------ECHNYC----------VHGT 410
            ...||.|..|      .:.|.:|                      .|...|          ::.:
  Fly   343 VSMAAYDSLI------RANCSVRAAEFICGALEPECRPLHIGQLPPCRRICKAILEACSIPIYNS 401

  Fly   411 CQMSEL----AYPKCY----CQ-PGFKGERC---ELSVCSGLCLNGG-------HCRVSKDENE- 455
            ..:.||    .||..:    |: |..:.:.|   |.....|.|:...       .|:..:||:|
  Fly   402 DVLGELFDCNLYPDAHESHKCEDPTRRRDYCYGNEFQCHDGSCIPQNWQCDKIKDCQGGEDEDEQ 466

  Fly   456 APSCECPAKFGGARCEQNSTEICSLFCRLLKHEPEMYVPFGCHSICEELAQDNSTNIAIPQYQHL 520
            ...|| |.:|   ||..|..      |.:.|:..:..:  .|....:|...|...:..:..:...
  Fly   467 CLVCE-PDEF---RCRSNEK------CLVEKYRCDQNI--DCMDGSDEQDCDEYGSGDLAPFDES 519

  Fly   521 EVCLTPRVWT 530
            |:...|||:|
  Fly   520 ELNAFPRVFT 529

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cue	NP_612113.2	TerD_like	48..>85	CDD:473128	0/6 (0%)
		YvrE	<73..>164	CDD:442613	18/112 (16%)
		LY	101..141	CDD:214531	7/43 (16%)
		Ldl_recept_b	167..208	CDD:459654	5/41 (12%)
		LY	193..237	CDD:214531	8/43 (19%)
CG6739	NP_609130.1	CRD_FZ	314..427	CDD:143549	17/118 (14%)
		LDLa	432..464	CDD:238060	6/31 (19%)
		LDLa	470..505	CDD:238060	11/46 (24%)
		LDLa	697..731	CDD:238060