Sequence 1: | NP_612113.2 | Gene: | cue / 38174 | FlyBaseID: | FBgn0011204 | Length: | 644 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001128355.1 | Gene: | Lrp12 / 314941 | RGDID: | 1304943 | Length: | 858 | Species: | Rattus norvegicus |
Alignment Length: | 249 | Identity: | 50/249 - (20%) |
---|---|---|---|
Similarity: | 87/249 - (34%) | Gaps: | 77/249 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 369 EDERCMNDGEYRAATDLCICPTGFKGSRCEIRECHNYCVHGTCQMSELAYPKCYCQPGFKGERCE 433
Fly 434 LSVCSGLCLNGGHCRVSKDENEAPSCECPAKFGGARCEQNSTEICSLFCRLLKHEPEMYVPFGCH 498
Fly 499 SICEELAQDNSTNIAIPQYQHLEVCLTPRVWTSSVIIILVVGIVSSLLLVAV--------IVQGI 555
Fly 556 RRLYKPKRPRIRKTFVVRKQARTNSAGD-------TPLTNRPLATEQCEITIEN 602 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cue | NP_612113.2 | LY | 101..141 | CDD:214531 | |
Ldl_recept_b | 167..208 | CDD:278487 | |||
LY | 193..237 | CDD:214531 | |||
Lrp12 | NP_001128355.1 | CUB | 47..158 | CDD:238001 | |
LDLa | 166..200 | CDD:238060 | |||
LDLa | 215..254 | CDD:238060 | |||
CUB | 267..371 | CDD:238001 | |||
LDLa | 375..410 | CDD:238060 | 8/27 (30%) | ||
LDLa | 413..448 | CDD:238060 | 9/55 (16%) | ||
LDLa | 451..485 | CDD:238060 | 8/50 (16%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |