DRSC/TRiP Functional Genomics Resources

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Protein Alignment cue and F32E10.8

DIOPT Version :10

Sequence 1:NP_612113.2 Gene:cue / 38174 FlyBaseID:FBgn0011204 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_501228.1 Gene:F32E10.8 / 260105 WormBaseID:WBGene00017995 Length:134 Species:Caenorhabditis elegans


Alignment Length:70 Identity:18/70 - (25%)
Similarity:28/70 - (40%) Gaps:13/70 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   401 ECHNYCV----HGTCQMSELAYP-KCYCQPGFKGERCELSVC---SGLCLNGGHCRVSKDENEAP 457
            |..|.|:    :...|:.:::.. ||   |.|.....:.|.|   :.:|.....||...||.|  
 Worm    60 ELPNICLKRNSYNKLQLQDVSVGLKC---PSFWFRCTDSSSCIAPNRVCDKYKDCRDGSDERE-- 119

  Fly   458 SCECP 462
            :|..|
 Worm   120 NCNQP 124

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
cueNP_612113.2 TerD_like 48..>85 CDD:473128
YvrE <73..>164 CDD:442613
LY 101..141 CDD:214531
Ldl_recept_b 167..208 CDD:459654
LY 193..237 CDD:214531