Protein Alignment cue and R08E3.1

DIOPT Version :9

• Sequence 1: NP_612113.2
• Gene: cue / 38174
• FlyBaseID: FBgn0011204
• Length: 644
• Species: Drosophila melanogaster
• Sequence 2: NP_001338800.1
• Gene: R08E3.1 / 180758
• WormBaseID: WBGene00019957
• Length: 1943
• Species: Caenorhabditis elegans
• Alignment Length: 255
• Identity: 59/255 - (23%)
• Similarity: 88/255 - (34%)
• Gaps: 54/255 - (21%)

  Fly   373 CMNDGEYRAATDLCICPTGFKGSRCEIRECHNYCVHGTCQMSELAYPKCYCQPGFKGERCELSVC 437
            |.:||..:..:  |:|...:..:.|..|:|.|:...|. ..|.....:|.|.|||.|..||
 Worm    37 CSHDGFLKDGS--CVCTADYNSNSCLKRKCRNFGFDGQ-SFSSNKVDRCICPPGFLGRNCE---- 94

  Fly   438 SGLCLNGGHCRVSKDENEAPSCECPAKFGGARCEQNST-EICSLFCRLLKHEPEMY--------- 492
            ...|:.|.:...|...:| .|....|.|.....|...| .|.:|||     |.|.|
 Worm    95 PVKCVPGSNQAYSSSNSE-KSISLLASFNTKMAETWQTGNIGNLFC-----EKEGYWRSFNYNYD 153

  Fly   493 ------VPFGCHSICEELAQD------------NSTNIAIPQYQHLEVCLTPRVWTSSVIIILVV 539
                  .|....:.|.|..||            |:|........:|...:......|.|.::..:
 Worm   154 NAGYTSSPSENTTTCTEKVQDYLTPDPCQNDYGNATTCGQLDINNLNSLVQNSPPNSIVFVVTNM 218

  Fly   540 GIVSSLLLVA----VIVQGIRRLYKPKRPRIRKTFVVRKQA--RTNSAGDTPLTNRPLAT 593
            |::.|....|    :|...|.|       ||:...:|....  .::.:|...|:|...||
 Worm   219 GVIPSSATDAMAEDIIATSIAR-------RIQINVIVYNNTDFLSSDSGLAYLSNITSAT 271

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cue	NP_612113.2	LY	101..141	CDD:214531
		Ldl_recept_b	167..208	CDD:278487
		LY	193..237	CDD:214531
R08E3.1	NP_001338800.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24044
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100