Sequence 1: | NP_612113.2 | Gene: | cue / 38174 | FlyBaseID: | FBgn0011204 | Length: | 644 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491270.2 | Gene: | lrp-2 / 171981 | WormBaseID: | WBGene00003072 | Length: | 4858 | Species: | Caenorhabditis elegans |
Alignment Length: | 803 | Identity: | 161/803 - (20%) |
---|---|---|---|
Similarity: | 264/803 - (32%) | Gaps: | 289/803 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 ATCLLTPAHGTPLEWDFAVTLRTKIQFMDSSWQTIATAAHEF----DELSALTFDESEELIYFND 77
Fly 78 LKHRNGSIFSLKRDLIAAN-----HVAEQTIART---GN---------------------ESVGG 113
Fly 114 L-AYDPLNMNLFWSDT----------EQRKIFFAPIHGSATPQVLVDLSAEGGRPDGVAVDVCRR 167
Fly 168 KLYWTNSNVTHPTVERINLDG-----------SNRTVIISSNIDMPRGIVVDQLSDRLFWIDDLK 221
Fly 222 GVFFSVESSKLDGSDRQVVLK-DKHHEPLNLAVTNDAIY-------------WTDRTTRAVWSHP 272
Fly 273 KV-PVIKVTTTSKPDEEDSTDSTDFKDPEPVAEDCPLVRVANLSEEARGIVARTGFYQRLQKDHH 336
Fly 337 CASIVRKVKERVDEQSRKFEI--RSLLDQKIKVLEDERCMNDGEYRAATD-------LCICPTGF 392
Fly 393 KGSRCEIRECHNYCVHG-TCQMSEL---------------------------------------- 416
Fly 417 -------AYPKCYCQPGFKGERC----ELSVCSG------------------------------- 439
Fly 440 ----LCLNGGHCRVSKDENEAPSCECPAKFGGARCEQNSTEICSLFCRLLKHEPEMYVPFG---- 496
Fly 497 -----------CHSICEELAQDNSTNIAIPQYQHLEVCLTPRVWTSSVIIILVVGIVSSLLLVAV 550
Fly 551 IVQGIRRLYKPKRPRIRKTFVVRKQARTNSAG---DTPLTNRPLATEQCEITIENCCNMNICETP 612
Fly 613 CFDPKLVEQTLSKSSCKEDKKIL 635 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cue | NP_612113.2 | LY | 101..141 | CDD:214531 | 14/74 (19%) |
Ldl_recept_b | 167..208 | CDD:278487 | 13/51 (25%) | ||
LY | 193..237 | CDD:214531 | 15/43 (35%) | ||
lrp-2 | NP_491270.2 | LDLa | 80..119 | CDD:197566 | |
LDLa | 130..162 | CDD:197566 | |||
LY | 668..702 | CDD:214531 | |||
LY | 707..758 | CDD:214531 | |||
LY | 759..801 | CDD:214531 | |||
LDLa | 968..1000 | CDD:197566 | |||
LDLa | 1013..1047 | CDD:238060 | |||
LDLa | 1053..1087 | CDD:238060 | |||
LDLa | 1098..1129 | CDD:238060 | |||
LDLa | 1144..1175 | CDD:238060 | |||
LDLa | 1182..1216 | CDD:238060 | |||
FXa_inhibition | 1276..1305 | CDD:291342 | |||
LY | 1421..1463 | CDD:214531 | |||
LY | 1465..1508 | CDD:214531 | |||
LY | 1521..1555 | CDD:214531 | |||
LY | 2480..2521 | CDD:214531 | |||
LDLa | 2681..2715 | CDD:238060 | |||
LDLa | 2717..2751 | CDD:238060 | |||
LDLa | <2774..2798 | CDD:238060 | |||
LDLa | 2819..2851 | CDD:238060 | |||
LDLa | 2856..2891 | CDD:238060 | |||
LDLa | 2904..2938 | CDD:238060 | |||
LDLa | 2988..3020 | CDD:197566 | |||
LY | 3231..3270 | CDD:214531 | |||
Ldl_recept_b | 3296..3336 | CDD:278487 | |||
LY | 3319..3362 | CDD:214531 | |||
LY | 3363..3404 | CDD:214531 | |||
LDLa | 3481..3514 | CDD:197566 | |||
LDLa | 3574..3609 | CDD:238060 | |||
LDLa | 3614..3649 | CDD:197566 | |||
LDLa | 3659..3693 | CDD:238060 | |||
LDLa | 3881..3912 | CDD:238060 | |||
LY | 4084..4125 | CDD:214531 | 13/44 (30%) | ||
LY | 4139..4181 | CDD:214531 | 15/44 (34%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |