| Sequence 1: | NP_612113.2 | Gene: | cue / 38174 | FlyBaseID: | FBgn0011204 | Length: | 644 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_011238756.1 | Gene: | Lrp8 / 16975 | MGIID: | 1340044 | Length: | 1010 | Species: | Mus musculus |
| Alignment Length: | 598 | Identity: | 120/598 - (20%) |
|---|---|---|---|
| Similarity: | 202/598 - (33%) | Gaps: | 209/598 - (34%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 63 ALTFDESEELIYFNDLKHRNGSIFSLKRDLIAANHVAEQTIARTGN-ESVGGLAYDPLNMNLFWS 126
Fly 127 DTEQRKIFFAPIHGSATPQVLVDLSAEGGRPDGVAVDVCRRKLYWTNSNVTHPTVERINLDGSNR 191
Fly 192 TVIISSNIDMPRGIVVDQLSDRLFWIDDLKGVFFSVESSKLDGSDRQVVL--KDKHHEPLNLAVT 254
Fly 255 NDAIYWTDRTTRAVWSHPKVPVIKVTTTSKPDEEDSTDSTDFKDPEPVAEDCPLVRVANLSEEAR 319
Fly 320 GIVARTGFYQRLQKDHHCASIVRKVKERVDEQSRKFEIRSLLDQKIKVLEDERCMNDGEYRAATD 384
Fly 385 LCICPTGFKGSRCEIRECHNYCVHGTCQMSELAYPKCYCQPGFKGERCELSV-----CSGLCLNG 444
Fly 445 GHCRVSKDENEAP--SCECPAKF----GGARC-----EQNSTEICSLFCRLLK----------HE 488
Fly 489 PEMYVPFGCHSICEELAQDNSTNIAIPQYQHLEVCLTPRVWTS--------------SVIIILVV 539
Fly 540 GIVSSLLLVAVIVQG---IRRLYKPK--------RPRIRKTFVVRKQ-----ARTNSAG---DTP 585
Fly 586 LTN--RPLATEQC 596 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| cue | NP_612113.2 | LY | 101..141 | CDD:214531 | 10/40 (25%) |
| Ldl_recept_b | 167..208 | CDD:278487 | 12/40 (30%) | ||
| LY | 193..237 | CDD:214531 | 15/43 (35%) | ||
| Lrp8 | XP_011238756.1 | LDLa | 41..75 | CDD:238060 | |
| LDLa | 79..111 | CDD:197566 | |||
| LDLa | 121..157 | CDD:238060 | |||
| LDLa | 200..232 | CDD:197566 | |||
| LDLa | 256..286 | CDD:238060 | |||
| LDLa | 292..326 | CDD:238060 | |||
| LDLa | 330..366 | CDD:381805 | |||
| FXa_inhibition | 387..421 | CDD:373209 | |||
| EGF_CA | 423..453 | CDD:214542 | |||
| LY | 492..527 | CDD:214531 | 9/27 (33%) | ||
| LY | 537..578 | CDD:214531 | 10/40 (25%) | ||
| Ldl_recept_b | 599..639 | CDD:278487 | 12/40 (30%) | ||
| LY | 623..665 | CDD:214531 | 15/44 (34%) | ||
| Ldl_recept_b | 686..725 | CDD:278487 | 12/156 (8%) | ||
| FXa_inhibition | 744..781 | CDD:373209 | 8/41 (20%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||