DRSC/TRiP Functional Genomics Resources

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Protein Alignment cue and Egf

DIOPT Version :9

Sequence 1:NP_612113.2 Gene:cue / 38174 FlyBaseID:FBgn0011204 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_011238312.1 Gene:Egf / 13645 MGIID:95290 Length:1221 Species:Mus musculus


Alignment Length:594 Identity:137/594 - (23%)
Similarity:222/594 - (37%) Gaps:207/594 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 SWQTIATAAHEF--DELSALTFDESEELIYFN--DLKHRN--------------GSIFSLKRDLI 93
            ||:......::.  |..|.........|::.|  |::|.:              |.:|:|..|.:
Mouse   468 SWECDCFPGYDLQSDRKSCAASGPQPLLLFANSQDIRHMHFDGTDYKVLLSRQMGMVFALDYDPV 532

  Fly    94 AANHVAEQT-----------------IARTGNESVGGLAYDPLNMNLFWSDTEQRKIFFAPIHGS 141
            .:.....||                 :...|.:::.|||.|.:...::|:|:.:     :.:.||
Mouse   533 ESKIYFAQTALKWIERANMDGSQRERLITEGVDTLEGLALDWIGRRIYWTDSGK-----SVVGGS 592

  Fly   142 ATPQVLVDLSAEG---------GRPDGVAVDVCRRKLYWTNSNVTHPTVERINLDGSNRTVIISS 197
                   |||.:.         .||.|:||....|:|:||:..:: |.:|..:|.||:|.:|.||
Mouse   593 -------DLSGKHHRIIIQERISRPRGIAVHPRARRLFWTDVGMS-PRIESASLQGSDRVLIASS 649

  Fly   198 NIDMPRGIVVDQLSDRLFWIDDLKGVFFSVESSKLDGSDRQVVLKDKHHEPLNLAVTNDAIYWTD 262
            |:..|.||.:|.|:|.|:|.|..:.|   :|.:.||||.|:.::::....|.:|||..|.::.:|
Mouse   650 NLLEPSGITIDYLTDTLYWCDTKRSV---IEMANLDGSKRRRLIQNDVGHPFSLAVFEDHLWVSD 711

  Fly   263 RTTRAVWSHPKVPVIKVTTTS------------KPDEEDSTDSTDFKDP--EPVAEDCPLVR--- 310
                  |:.|.  ||:|...:            ||      .|.....|  :|.|:.| |.|   
Mouse   712 ------WAIPS--VIRVNKRTGQNRVRLQGSMLKP------SSLVVVHPLAKPGADPC-LYRNGG 761

  Fly   311 VANLSEEARG---IVARTGFYQR------LQKDHHCASIVRKVKERVD--------EQSRKFEI- 357
            ..::.:|:.|   .:.|.||.:.      |.:|:...|     .|..|        ..|.:.|: 
Mouse   762 CEHICQESLGTARCLCREGFVKAWDGKMCLPQDYPILS-----GENADLSKEVTSLSNSTQAEVP 821

  Fly   358 ------RSLLDQKIKV----LEDE----------RCMNDGE-----------------------Y 379
                  .|.|..:|.|    .||:          ||::|||                       .
Mouse   822 DDDGTESSTLVAEIMVSGMNYEDDCGPGGCGSHARCVSDGETAECQCLKGFARDGNLCSDIDECV 886

  Fly   380 RAATD---------------LCICPTGFKG---SRCEIREC----HNYCVHGTCQMSELAYPKCY 422
            .|.:|               :|.|..|::|   |..:|.||    ||...:..|..:|..| .|.
Mouse   887 LARSDCPSTSSRCINTEGGYVCRCSEGYEGDGISCFDIDECQRGAHNCGENAACTNTEGGY-NCT 950

  Fly   423 C--QPGFKGERCELSVC-----------------------SGLCLNGGHCRVSKDENEAPSCECP 462
            |  :|...|..|..|..                       .|.|||||.| :..:..::.:|.|.
Mouse   951 CAGRPSSPGLSCPDSTAPSLLGEDGHHLDRNSYPGCPSSYDGYCLNGGVC-MHIESLDSYTCNCV 1014

  Fly   463 AKFGGARCE 471
            ..:.|.||:
Mouse  1015 IGYSGDRCQ 1023

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cueNP_612113.2 LY 101..141 CDD:214531 9/56 (16%)
Ldl_recept_b 167..208 CDD:278487 17/40 (43%)
LY 193..237 CDD:214531 19/43 (44%)
EgfXP_011238312.1 LY <86..114 CDD:214531
LY <125..156 CDD:214531
LY 158..199 CDD:214531
FXa_inhibition 370..405 CDD:373209
FXa_inhibition 418..446 CDD:373209
FXa_inhibition 453..486 CDD:373209 3/17 (18%)
LY 514..556 CDD:214531 6/41 (15%)
LY 557..599 CDD:214531 12/53 (23%)
LY 600..643 CDD:214531 14/43 (33%)
LY 643..686 CDD:214531 20/45 (44%)
LY 687..728 CDD:214531 11/48 (23%)
FXa_inhibition 755..790 CDD:373209 8/35 (23%)
EGF_CA 881..921 CDD:311536 6/39 (15%)
EGF_CA 923..>951 CDD:311536 9/28 (32%)
PHA02887 <986..1023 CDD:165214 11/37 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.928771 Normalized mean entropy S7221
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.760

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