DRSC/TRiP Functional Genomics Resources

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Protein Alignment cue and ImpE1

DIOPT Version :10

Sequence 1:NP_612113.2 Gene:cue / 38174 FlyBaseID:FBgn0011204 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_316120.5 Gene:ImpE1 / 1276741 VectorBaseID:AGAMI1_004806 Length:822 Species:Anopheles gambiae


Alignment Length:639 Identity:119/639 - (18%)
Similarity:199/639 - (31%) Gaps:206/639 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 SATPQVLVDLSAEGGRPDGVAVDVCRRKLYWTNSNVTHPTVERINLDGSNRTVIIS--------- 196
            ||...:..:..:.|...||::          |...:...|..|...:|...|..:|         
Mosquito   228 SAEEHITTEYQSAGSEEDGIS----------TTDFIEITTSSRYPGEGERVTTTVSGMERYENTE 282

  Fly   197 --SNIDMPRGIVVDQ-----LSDRL------FWIDDLKGVFFSVESSK--LDGSDRQ-------- 238
              :|::..   |.:|     |:|.|      .|..::.....|.|..:  ||.||.:        
Mosquito   283 EYANLEQE---VEEQFKRQELADALATSTAGAWASEIAEAITSQEREQDALDKSDSEGVTTIEVV 344

  Fly   239 VVLKD-------------KHHEPLNLAVTNDAIYWT---------------DRT--TRAVWSHPK 273
            .|..|             :.|||    .|.:..|.|               |||  ..|.::...
Mosquito   345 TVSNDGQTTERSETTTLTQDHEP----TTTELQYDTEEPSDVENEVELVEYDRTDAPEATYTQQA 405

  Fly   274 VPVIKVTTTSKPDE--EDST---DSTDFKDPEPVAEDCPLVRVANLSEEARGIVARTGFYQRLQK 333
            ..:|:..||:...|  ||:|   .||:..:.|  |.|...:....|.|:...:..|....:...:
Mosquito   406 ASLIQQETTTATTEHMEDTTLAATSTEQSNTE--ANDAKELTTTELIEQYHDVQLRRQDSKLFDE 468

  Fly   334 DHHCASIVRKVKERVDEQSRKFEIRSL-------------------------LDQKIKVLEDE-- 371
            :.     |.::.|:......:||.|..                         |..:...:|.|  
Mosquito   469 EE-----VEELVEKSPAPKERFEARETTRHAEHENEIVDTHAVDTTTETLLRLASRTTAMEPEAP 528

  Fly   372 -----RCMNDGEYRAATDLCICPTGF-----KGSRCEIRECHNYC-VHGTCQMSELAYPKCYCQP 425
                 ...:....|...||...|...     ...:|::.:.::|| ..|.|..| ...|...|:.
Mosquito   529 LSTTTAATSTARIRTRVDLGDGPVSLGLSCASNEQCQLADPYSYCNDEGRCDCS-YRTPDDACRA 592

  Fly   426 GFKGERCELSV--C--SGLCLN-----GGH--CRVSKDENEAPSCECPAKFGGA----------- 468
            ...|  |....  |  ||:|::     .|.  |..:.||    .|....|..|.           
Mosquito   593 TNTG--CSRGTFQCRSSGICISWFFVCDGRPDCSDASDE----ECNFSLKANGTQQQRAASCPEL 651

  Fly   469 --RCEQNS-----TEICSLFCRLLKHEPEMYVPFGCHSICEELAQDNSTNIAIPQYQHLEVCLT- 525
              |||::.     ..||....:....|.|:...|.....|.|......:...:|:|::....:: 
Mosquito   652 SFRCEKSGRCISRAGICDGKAQCPHGEDEVGCDFRKSRKCPEHTFMCRSGECLPEYEYCNAIVSC 716

  Fly   526 -------PRVWTSSVIIILVVGIVSSLLLVAVIVQGIRRLYKPKR---PRIRKTFVVRKQARTNS 580
                   |.:..|..:....|.::|     ....:|  |.|.|.|   .|.|.|.:|  .:..:.
Mosquito   717 RDGSDEPPHLCGSRAVPNFFVKLLS-----GPTARG--RNYCPMRCANGRCRSTAIV--CSGRDG 772

  Fly   581 AGDTPLTNRPLATEQCEITIENCCNMNICETPCFD-------PKLVEQTLSKSS 627
            .||.              :.|:.|::..|..|.::       |.:|.:..|::|
Mosquito   773 CGDG--------------SDEDRCSVCRCPAPAYNNVLAPIVPAVVSKPRSRTS 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cueNP_612113.2 TerD_like 48..>85 CDD:473128
YvrE <73..>164 CDD:442613 5/22 (23%)
LY 101..141 CDD:214531 119/639 (19%)
Ldl_recept_b 167..208 CDD:459654 8/51 (16%)
LY 193..237 CDD:214531 13/67 (19%)
ImpE1XP_316120.5 None
Blue background indicates that the domain is not in the aligned region.

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