Sequence 1: | NP_612113.2 | Gene: | cue / 38174 | FlyBaseID: | FBgn0011204 | Length: | 644 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002939758.3 | Gene: | lrp1 / 100485788 | XenbaseID: | XB-GENE-479843 | Length: | 4543 | Species: | Xenopus tropicalis |
Alignment Length: | 679 | Identity: | 143/679 - (21%) |
---|---|---|---|
Similarity: | 236/679 - (34%) | Gaps: | 229/679 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 67 DESEELIYFNDLKHRNGSIFSLKRDLIAANHVAEQTIARTGNESVGGLAYDPLNM-----NLFWS 126
Fly 127 DTEQRKIFFAPIHGSAT----------PQVLVDLSAEGGR-PDGVAVDVCRRKLYWTNSNVTHPT 180
Fly 181 VERINLDGSNRTVIISSNIDMPRGIVVDQLSDRLFWIDDLKGVFFSVESSKLDGSDRQVVLKDKH 245
Fly 246 HEPLNLAVT--NDAIYWTDRTTRAVWSHPKVPVIKVTTTSKPDEEDSTDSTDFKDPEPVAEDCPL 308
Fly 309 VRVAN------------LSEEARGIVARTGFYQRLQK------------DHHCASIVRKVKERVD 349
Fly 350 EQSRKFEIRSLLDQK----IKVLEDE-------------------------------------RC 373
Fly 374 MNDGE---YRAATDLCICPTGFKGSRCEIRECHNYCVH-GTCQMSELAYPKCYCQPGFKGERCEL 434
Fly 435 SVC-SGLCLNGGHCRVSKDENEAPSCECPAKFGGARCEQNSTEICSLFCRLLKHEPEMYVPFGCH 498
Fly 499 SICEELAQDNSTNIAIPQYQ------H--------------------------LEVCLT------ 525
Fly 526 ------------------PRVWT-------------SSVIIILVVGIVSSLLLVAVIVQGIRRLY 559
Fly 560 KPKRPRIRKTFVVRKQARTNSAGDTPLTN 588 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cue | NP_612113.2 | LY | 101..141 | CDD:214531 | 12/44 (27%) |
Ldl_recept_b | 167..208 | CDD:278487 | 14/40 (35%) | ||
LY | 193..237 | CDD:214531 | 16/43 (37%) | ||
lrp1 | XP_002939758.3 | LDLa | 34..67 | CDD:197566 | |
Ldl_recept_a | 78..112 | CDD:395011 | |||
FXa_inhibition | 127..156 | CDD:405372 | |||
FXa_inhibition | 168..196 | CDD:405372 | |||
LY | 283..322 | CDD:214531 | |||
LY | 325..366 | CDD:214531 | |||
LY | 369..409 | CDD:214531 | |||
FXa_inhibition | 494..527 | CDD:405372 | |||
LY | 559..601 | CDD:214531 | |||
LY | 602..641 | CDD:214531 | |||
LY | 648..697 | CDD:214531 | |||
LY | <708..741 | CDD:214531 | |||
FXa_inhibition | 811..846 | CDD:405372 | |||
LDLa | 857..889 | CDD:197566 | |||
LDLa | 899..932 | CDD:238060 | |||
LDLa | 939..971 | CDD:197566 | |||
LDLa | 982..1015 | CDD:238060 | |||
LDLa | 1019..1052 | CDD:238060 | |||
LDLa | 1066..1101 | CDD:238060 | |||
LDLa | 1108..1144 | CDD:238060 | |||
LDLa | 1149..1182 | CDD:197566 | |||
FXa_inhibition | 1189..1225 | CDD:405372 | |||
LY | 1340..1382 | CDD:214531 | |||
LY | 1384..1427 | CDD:214531 | |||
LY | 1428..1471 | CDD:214531 | |||
FXa_inhibition | 1544..1582 | CDD:405372 | |||
LY | 1617..1653 | CDD:214531 | |||
LY | 1654..1697 | CDD:214531 | |||
LY | 1701..1738 | CDD:214531 | |||
LY | 1738..1779 | CDD:214531 | |||
FXa_inhibition | 1851..1887 | CDD:405372 | |||
LY | 1960..2000 | CDD:214531 | |||
LY | 2001..2044 | CDD:214531 | |||
LY | 2046..2088 | CDD:214531 | |||
FXa_inhibition | 2160..2195 | CDD:405372 | |||
YvrE | 2253..>2443 | CDD:225921 | |||
Ldl_recept_b | 2343..2384 | CDD:395012 | |||
LY | 2369..2410 | CDD:214531 | |||
LDLa | 2527..2556 | CDD:238060 | |||
LDLa | 2565..2599 | CDD:238060 | |||
LDLa | 2604..2638 | CDD:238060 | |||
LDLa | <2665..2687 | CDD:238060 | |||
LDLa | 2695..2729 | CDD:238060 | |||
LDLa | 2733..2764 | CDD:197566 | |||
LDLa | 2772..2805 | CDD:197566 | |||
LDLa | 2816..2848 | CDD:197566 | |||
LDLa | 2856..2889 | CDD:197566 | |||
LDLa | 2903..2937 | CDD:238060 | |||
cEGF | 2960..2983 | CDD:403760 | |||
EGF_CA | 2980..3014 | CDD:214542 | |||
LY | 3050..3094 | CDD:214531 | |||
LY | 3095..3137 | CDD:214531 | |||
LY | 3139..3181 | CDD:214531 | |||
LY | 3183..3224 | CDD:214531 | |||
LY | 3225..3265 | CDD:214531 | |||
FXa_inhibition | 3295..3331 | CDD:405372 | |||
LDLa | 3335..3366 | CDD:238060 | |||
LDLa | 3375..3409 | CDD:238060 | |||
LDLa | 3414..3449 | CDD:238060 | |||
LDLa | 3453..3486 | CDD:197566 | |||
LDLa | 3494..3527 | CDD:197566 | |||
LDLa | 3537..3571 | CDD:238060 | |||
Ldl_recept_a | 3574..3610 | CDD:395011 | |||
LDLa | 3614..3648 | CDD:238060 | |||
LDLa | 3654..3686 | CDD:197566 | |||
LDLa | 3696..3732 | CDD:238060 | |||
LDLa | 3745..3775 | CDD:238060 | |||
LY | 3954..3990 | CDD:214531 | 11/37 (30%) | ||
Ldl_recept_b | 4011..4051 | CDD:395012 | 11/41 (27%) | ||
LY | 4035..4076 | CDD:214531 | 11/46 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |