Sequence 1: | NP_612113.2 | Gene: | cue / 38174 | FlyBaseID: | FBgn0011204 | Length: | 644 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009301583.1 | Gene: | lrp3 / 100170796 | ZFINID: | ZDB-GENE-080116-3 | Length: | 824 | Species: | Danio rerio |
Alignment Length: | 328 | Identity: | 69/328 - (21%) |
---|---|---|---|
Similarity: | 115/328 - (35%) | Gaps: | 97/328 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 284 KPDEEDSTD-----STDFKDPEPVAEDCPL-------VRVAN-LSEEARGIVARTGFYQR----- 330
Fly 331 LQKDHHCASIVRKVKERVDEQ--SRKFEIRSLLDQKIKVLEDERCMNDGEYRAATDLCICPTGFK 393
Fly 394 GSRCEIRECHNY--CVHGTCQMSELAYPKCYCQPGFKGERCE--LSVC---SGLCLNGGHCRVSK 451
Fly 452 DENEAPSCECPAKFGGARCEQNSTEICSLFCRLLKHEPEMYVPFGC--HSICEELAQDNSTNIAI 514
Fly 515 PQYQHLEVCLTPRVWTSSVIIILVVGIVSSLLLVAV----IVQGIR----RLYKPKRPRIRKTFV 571
Fly 572 VRK 574 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cue | NP_612113.2 | LY | 101..141 | CDD:214531 | |
Ldl_recept_b | 167..208 | CDD:278487 | |||
LY | 193..237 | CDD:214531 | |||
lrp3 | XP_009301583.1 | CUB | 31..141 | CDD:238001 | |
LDLa | 151..185 | CDD:238060 | |||
LDLa | 197..234 | CDD:238060 | |||
CUB | 239..350 | CDD:238001 | 19/92 (21%) | ||
LDLa | 354..389 | CDD:238060 | 11/46 (24%) | ||
LDLa | 392..428 | CDD:238060 | 13/37 (35%) | ||
LDLa | 431..465 | CDD:238060 | 8/52 (15%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |