DRSC/TRiP Functional Genomics Resources

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Protein Alignment hfp and PUF60

DIOPT Version :9

Sequence 1:NP_525123.2 Gene:hfp / 38173 FlyBaseID:FBgn0028577 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_001349824.1 Gene:PUF60 / 22827 HGNCID:17042 Length:596 Species:Homo sapiens


Alignment Length:606 Identity:304/606 - (50%)
Similarity:375/606 - (61%) Gaps:108/606 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 TGDVKFGPG-TRSALLGLLGGALPKLSSEQHDLVSKAKKYAMEQSIKMVLMKQTLAHQQQQLAT- 115
            |..:|...| :.:|.||     ||.|:.||.:.:.||||||||||||.||:|||:|||||||.. 
Human    76 TDSIKMENGQSTAAKLG-----LPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTIAHQQQQLTNL 135

  Fly   116 ----------------QRTQVQRQQALALMCRVYVGSISFELKEDTIRVAFTPFGPIKSINMSWD 164
                            |....|||:|||:|||||||||.:||.|||||.||.||||||||:||||
Human   136 QMAAVTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWD 200

  Fly   165 PITQKHKGFAFVEYEIPEGAQLALEQMNGALMGGRNIKVGRPSNMPQAQQVIDEVQEEAKSFNRI 229
            .:|.|||||||||||:||.|||||||||..::||||||||||||:.|||.:||::.|||::||||
Human   201 SVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFNRI 265

  Fly   230 YVASIHPDLSEEDIKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFDLG 294
            ||||:|.|||::||||||||||.|..|.||:..:...|||||||||...|:..:|::||||||||
Human   266 YVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLG 330

  Fly   295 GQLLRVGRSITPPNALACPTTNSTMPTAAAVAAAAATAKIQALDAVASNAVLGLSQNTPVMAAGA 359
            ||.||||:::|||..|..|.|...:|.|||||||||||||.|.:|||..||||            
Human   331 GQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAAVLG------------ 383

  Fly   360 VVTKVGAMPVVSAATSAAALHPALAQAAP-ALLPPGIFQAPTPVAPSLLGVPAGLQPLQAVVPTL 423
               .:|...:||         |||..|.| ..||..:..|..|      ||..|:.|        
Human   384 ---TLGTPGLVS---------PALTLAQPLGTLPQAVMAAQAP------GVITGVTP-------- 422

  Fly   424 PPPALLATPTLPMTVGGVGVGLVPTVA---TLAGAEASKGAAAAAALSAAANNAAVTAANLSENI 485
                  |.|.:|:|:..||| :.|.:|   ||...|..|                          
Human   423 ------ARPPIPVTIPSVGV-VNPILASPPTLGLLEPKK-------------------------- 454

  Fly   486 KKAHEKQQEELQKKLMDEGDVQTLQQQENMSIKGQSARQLVMQRLMRPVDSRVIILRNMVGPEDV 550
                ||::|||   ..:....:.|.:||:|||.|.|||.:|||:|:|..:|.|::|||||.|:|:
Human   455 ----EKEEEEL---FPESERPEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVDPKDI 512

  Fly   551 DETLQEEIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFVEFSAGAEAMRGKEALDGRFF 615
            |:.|:.|:.|||.|||.|:||||:.|||.|.||   ||||||||||||..:|..:..:||:||:|
Human   513 DDDLEGEVTEECGKFGAVNRVIIYQEKQGEEED---AEIIVKIFVEFSIASETHKAIQALNGRWF 574

  Fly   616 GGRRVVAELYDQGIFDQGDLS 636
            .||:||||:|||..||..|||
Human   575 AGRKVVAEVYDQERFDNSDLS 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hfpNP_525123.2 half-pint 10..637 CDD:130706 304/606 (50%)
RRM1_PUF60 130..205 CDD:240816 59/74 (80%)
RRM2_PUF60 227..303 CDD:240817 50/75 (67%)
RRM3_UHM_PUF60 536..636 CDD:241092 59/99 (60%)
PUF60NP_001349824.1 half-pint 44..596 CDD:130706 304/606 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158837
Domainoid 1 1.000 198 1.000 Domainoid score I3090
eggNOG 1 0.900 - - E1_KOG0124
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8614
Inparanoid 1 1.050 504 1.000 Inparanoid score I1356
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51929
OrthoDB 1 1.010 - - D438205at33208
OrthoFinder 1 1.000 - - FOG0005543
OrthoInspector 1 1.000 - - oto88714
orthoMCL 1 0.900 - - OOG6_104067
Panther 1 1.100 - - LDO PTHR47330
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4280
SonicParanoid 1 1.000 - - X3961
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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