DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment robl62A and robls54B

DIOPT Version :9

Sequence 1:NP_001261256.1 Gene:robl62A / 38170 FlyBaseID:FBgn0028567 Length:104 Species:Drosophila melanogaster
Sequence 2:NP_001097356.1 Gene:robls54B / 5740248 FlyBaseID:FBgn0263233 Length:112 Species:Drosophila melanogaster


Alignment Length:32 Identity:13/32 - (40%)
Similarity:21/32 - (65%) Gaps:0/32 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 LDTDDKLCFLRVKTRKHEFLVSPEEAFTVTVV 103
            :|..|:|..||::||.:|.|:.|:...|:.||
  Fly    72 IDPTDELLMLRIRTRTNEVLLVPDSKITLLVV 103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
robl62ANP_001261256.1 Robl_LC7 24..103 CDD:214939 11/30 (37%)
robls54BNP_001097356.1 Robl_LC7 16..103 CDD:214939 11/30 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4115
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1512428at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10779
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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