DRSC/TRiP Functional Genomics Resources

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Protein Alignment robl62A and dyrb-1

DIOPT Version :9

Sequence 1:NP_001261256.1 Gene:robl62A / 38170 FlyBaseID:FBgn0028567 Length:104 Species:Drosophila melanogaster
Sequence 2:NP_495943.1 Gene:dyrb-1 / 188872 WormBaseID:WBGene00012004 Length:95 Species:Caenorhabditis elegans


Alignment Length:81 Identity:25/81 - (30%)
Similarity:49/81 - (60%) Gaps:14/81 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GFVVSENAGDSLLHTSFDLTTAQSIVKHLHASFLKLAQSC------VRDLDTDDKLCFLRVKTRK 87
            |.:|.::|| .::|::.|....||     |.:||:  |.|      :|:||:.:.|.|||::|:|
 Worm    19 GIIVVDSAG-RVIHSTIDSDATQS-----HTAFLQ--QLCEKTKTSIRELDSSNDLTFLRLRTKK 75

  Fly    88 HEFLVSPEEAFTVTVV 103
            :|.:::|::...:.|:
 Worm    76 NEIMIAPDKDHVIMVI 91

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
robl62ANP_001261256.1 Robl_LC7 24..103 CDD:214939 24/79 (30%)
dyrb-1NP_495943.1 Robl_LC7 4..93 CDD:397386 25/81 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4115
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2020
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1512428at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.770

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