DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment robl62A and dynlrb2

DIOPT Version :9

Sequence 1:NP_001261256.1 Gene:robl62A / 38170 FlyBaseID:FBgn0028567 Length:104 Species:Drosophila melanogaster
Sequence 2:NP_001289961.1 Gene:dynlrb2 / 100001191 ZFINID:ZDB-GENE-120709-101 Length:96 Species:Danio rerio


Alignment Length:90 Identity:30/90 - (33%)
Similarity:51/90 - (56%) Gaps:8/90 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DNTNRITEQAQ----GFVVSENAGDSLLHTSFDLTTAQSIVKHLHASFLKLAQSCVRDLDTDDKL 78
            |...||  |||    |.:|....|.. :.|:.|.:|:......||...:| |:|.|||:|..::|
Zfish     6 DTLKRI--QAQHGVIGTIVVNGEGIP-IRTTLDNSTSVQYAGLLHQLTMK-ARSAVRDIDPQNEL 66

  Fly    79 CFLRVKTRKHEFLVSPEEAFTVTVV 103
            .|||::::|||.:|:|::.:.:..:
Zfish    67 TFLRIRSKKHEIMVAPDKEYLLIAI 91

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
robl62ANP_001261256.1 Robl_LC7 24..103 CDD:214939 27/82 (33%)
dynlrb2NP_001289961.1 Robl_LC7 5..93 CDD:281277 30/90 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4115
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1512428at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10779
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
54.880

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