DRSC/TRiP Functional Genomics Resources

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Protein Alignment stet and RBL6

DIOPT Version :10

Sequence 1:NP_788450.1 Gene:stet / 38169 FlyBaseID:FBgn0020248 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_172735.1 Gene:RBL6 / 837831 AraportID:AT1G12750 Length:307 Species:Arabidopsis thaliana


Alignment Length:226 Identity:61/226 - (26%)
Similarity:94/226 - (41%) Gaps:50/226 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 TLVELGFFVYHSVVTGEAAPRGPIPSDSMFIYRPDKRHEIWRFLFYMVLHAGWLHLGFNVAVQLV 293
            ||.:||...:..||.|                     :|.||.:..|.||||.:||..|:...::
plant    79 TLEKLGALDWKKVVQG---------------------NEKWRLITAMWLHAGIIHLVMNMFDVII 122

  Fly   294 FGLPLEMVHGSTRIACIYFSGVLAGSLGTSIFDPDVFLVGASGGVYALLAAHLANVLLNYHQMRY 358
            ||:.||...|..||..||......||:.:::|......|||||.:..|:.|.|:.:|.|:...:.
plant   123 FGIRLEQQFGFIRIGLIYLISGFGGSILSALFLQKSISVGASGALLGLMGAMLSELLTNWTIYKS 187

  Fly   359 GVIKLLHILVFVSFDFGFAI------YARYAGDELQLGSSSEFLAIDQAETA----------GA- 406
            .:..||..|..::.:....:      :|...|  |..|....|:.:.|.::.          || 
plant   188 KLCALLSFLFIIAINLAIGLLPWVDNFAHIGG--LLTGFCLGFILLMQPQSGWEEFRNSSQYGAR 250

  Fly   407 -------VSYVAHLAGA---IAGLTIGLLVL 427
                   ..||.....|   :||||:||::|
plant   251 ARSKYNPCQYVLFFVAAVLVVAGLTVGLVML 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stetNP_788450.1 EF-hand_7 87..157 CDD:463900
Rhomboid 262..428 CDD:426384 54/193 (28%)
RBL6NP_172735.1 Rhomboid 91..234 CDD:426384 44/165 (27%)
Blue background indicates that the domain is not in the aligned region.

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