DRSC/TRiP Functional Genomics Resources

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Protein Alignment stet and rhbdf1b

DIOPT Version :10

Sequence 1:NP_788450.1 Gene:stet / 38169 FlyBaseID:FBgn0020248 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_021335975.2 Gene:rhbdf1b / 563403 ZFINID:ZDB-GENE-130531-6 Length:894 Species:Danio rerio


Alignment Length:209 Identity:48/209 - (22%)
Similarity:85/209 - (40%) Gaps:42/209 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 PDKRHEIWRFLFYMVLHAGWLHLGFNVAVQLVFGLPLEMVHGSTRIACIYFSGVLAGSLGTSIFD 326
            ||:.:.:|..||   ||||.||...:|..|:.....||.:.|..||:.||....:.|:|.::||.
Zfish   689 PDQFYRLWLSLF---LHAGILHCLVSVCFQMTILRDLEKLAGWLRISIIYILSGITGNLASAIFL 750

  Fly   327 PDVFLVGASGGVYALLAAHLANVLLNYHQMR---YGVIKLLHILVFVSFDFGFAIYARYAGDELQ 388
            |....||.:|..:.:||.....:..::..:.   ....||..:::|: |.||...:         
Zfish   751 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFTKLSCVVLFL-FAFGLLPW--------- 805

  Fly   389 LGSSSEFLAIDQAETAGAVSYVAHLAGAIAG--LTIGLLVLKSF------EQKLHEQLLWWIALG 445
                              :...||:.|.::|  |:...|...||      .::|...:...:.:|
Zfish   806 ------------------IDNFAHICGFVSGFFLSFAFLPYISFGRMDMYRKRLQILVALTLFVG 852

  Fly   446 TYLALVVFAIAFNI 459
            .:.:.||....:.:
Zfish   853 IFSSFVVLFYVYPV 866

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stetNP_788450.1 EF-hand_7 87..157 CDD:463900
Rhomboid 262..428 CDD:426384 42/170 (25%)
rhbdf1bXP_021335975.2 None
Blue background indicates that the domain is not in the aligned region.

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