DRSC/TRiP Functional Genomics Resources

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Protein Alignment stet and rhbdl3

DIOPT Version :10

Sequence 1:NP_788450.1 Gene:stet / 38169 FlyBaseID:FBgn0020248 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_005166241.1 Gene:rhbdl3 / 550128 ZFINID:ZDB-GENE-050417-2 Length:407 Species:Danio rerio


Alignment Length:393 Identity:151/393 - (38%)
Similarity:222/393 - (56%) Gaps:52/393 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 DKWKLLFDMFDPEGFGEISVEEFLEALKSPEFLSQVPMNKRELLLERAKKAKLPTGPGYVTFQDF 152
            |:||.|||.:|||..|.||.|.|.:.|.:..  |::..:|.|:||..|.    ....|.:.:|||
Zfish    32 DQWKCLFDKYDPENSGFISTERFRDLLAAHG--SELDPHKLEVLLALAD----ANADGKICYQDF 90

  Fly   153 VNV--------MSGKRTRSFKCAVHHRDREVCSENDFQLVLNEP---PLFRKMVHAVAMEILPEE 206
            ||:        ||.||:.||:.|:....|::.:.     .|.|.   .|.|::|..||.|.||.|
Zfish    91 VNLVSSADELKMSNKRSNSFRQAILQGSRQLRNS-----ALREEVGLGLSRRLVRHVAYETLPRE 150

  Fly   207 RDRKYYADRYTCCPPPFFIILVTLVELGFFVYHSV-----VTGEAAP---RGPIPSDSMFIYRPD 263
            .|||:|.|.||.||||:.::.:|:.|:..|:|:.:     |...::|   :||:|      |.|.
Zfish   151 VDRKWYFDSYTYCPPPWLMLAITITEVVVFMYYGLQLNRWVLQVSSPYFLKGPLP------YHPQ 209

  Fly   264 KRHEIWRFLFYMVLHAGWLHLGFNVAVQLVFGLPLEMVHGSTRIACIYFSGVLAGSLGTSIFDPD 328
            .|.:.||||.|:.:|||..|||.|:|:||:.|:|||||||:.||..:|..|.|||||..|:.|..
Zfish   210 LRAQAWRFLSYIFMHAGIEHLGLNMAMQLLVGVPLEMVHGALRIGLVYVCGALAGSLAVSVTDMT 274

  Fly   329 VFLVGASGGVYALLAAHLANVLLNYHQMR--YGVIKLLHILVFVSFDFGFAIYARYAGDELQLGS 391
            ..:||:|||||||::||||||::|:..|:  :.:.::...||.:|.:||.|::.|......    
Zfish   275 APVVGSSGGVYALVSAHLANVVMNWSGMKCQFKLFRMAMALVCMSVEFGRAVWLRCYPPAF---- 335

  Fly   392 SSEFLAIDQAETAGAVSYVAHLAGAIAGLTIGLLVLKSFEQKLHEQLLWWIALGTYLALVVFAIA 456
                      ......|:||||.|...|||:|::||:::||:|.||.|:||....|...::..|.
Zfish   336 ----------PPCPNPSFVAHLGGVAVGLTLGVVVLQNYEQRLQEQSLFWIFFSVYTLFILCGIF 390

  Fly   457 FNI 459
            :||
Zfish   391 WNI 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stetNP_788450.1 EF-hand_7 87..157 CDD:463900 27/76 (36%)
Rhomboid 262..428 CDD:426384 71/167 (43%)
rhbdl3XP_005166241.1 EF-hand_7 31..95 CDD:463900 27/68 (40%)
Rhomboid 208..362 CDD:426384 71/167 (43%)

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