DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stet and parla

DIOPT Version :9

Sequence 1:NP_788450.1 Gene:stet / 38169 FlyBaseID:FBgn0020248 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001014320.1 Gene:parla / 541485 ZFINID:ZDB-GENE-050327-8 Length:383 Species:Danio rerio


Alignment Length:193 Identity:45/193 - (23%)
Similarity:68/193 - (35%) Gaps:74/193 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   275 MVL----HAGWLHLGFNVAVQLVFGLPLEMVHGSTRIACIYFSG------------VLAGSLGTS 323
            |||    |...:|:..|:.|...|...:..:.|..:...:|.||            ...|.||.|
Zfish   210 MVLSSFSHYSVIHMVVNMYVLWTFSSSIVSLLGREQFLALYLSGGVISTFVSYVFKTATGRLGPS 274

  Fly   324 IFDPDVFLVGASGGVYALLAAHLANVLLNYHQMRYGVIKLLHILVFVSFDFGFAIYARYAGDELQ 388
            :        ||||.:..:|||    |.....:.:.|::    :|..:||..|.|:.|        
Zfish   275 L--------GASGSIMTVLAA----VCTKIPEAKLGIV----LLPVISFSAGNALKA-------- 315

  Fly   389 LGSSSEFLAIDQAETAGAV------SYVAHLAGAIAGLTIGLLVLKSFEQKLHEQLLWWIALG 445
                  .:|:|   .||.|      .:.|||.||:.|                   :|:|..|
Zfish   316 ------LVALD---IAGLVLGWRFFDHAAHLGGALFG-------------------VWYIGYG 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stetNP_788450.1 EFh <75..115 CDD:298682
EF-hand_7 91..156 CDD:290234
Rhomboid 262..428 CDD:279958 42/174 (24%)
parlaNP_001014320.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 35..75
Rhomboid 210..347 CDD:279958 43/188 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0705
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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