DRSC/TRiP Functional Genomics Resources

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Protein Alignment stet and Rhbdf1

DIOPT Version :10

Sequence 1:NP_788450.1 Gene:stet / 38169 FlyBaseID:FBgn0020248 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_038941805.1 Gene:Rhbdf1 / 303008 RGDID:1305075 Length:907 Species:Rattus norvegicus


Alignment Length:224 Identity:52/224 - (23%)
Similarity:91/224 - (40%) Gaps:57/224 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 PDKRHEIWRFLFYMVLHAGWLHLGFNVAVQLVFGLPLEMVHGSTRIACIYFSGVLAGSLGTSIFD 326
            ||:.:.:|..||   ||||.||...:|..|:.....||.:.|..|||.||....:.|:|.::||.
  Rat   702 PDQFYRLWLSLF---LHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 763

  Fly   327 PDVFLVGASGGVYALLAAHLANVLLNYHQMR---YGVIKLLHILVFVSFDFGFAIYARYAGDELQ 388
            |....||.:|..:.:||.....:..::..:.   ....|||.:::|: |.||...:         
  Rat   764 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFL-FAFGLLPW--------- 818

  Fly   389 LGSSSEFLAIDQAETAGAVSYVAHLAGAIAGLTIGLLVLKSFEQKLHEQLLWWIALGTY------ 447
                              :...||::|.::||.:....|.            :|:.|.:      
  Rat   819 ------------------IDNFAHISGFVSGLFLSFAFLP------------YISFGKFDLYRKR 853

  Fly   448 LALVVF-AIAFNIMNG----FAMFNIRVE 471
            ..:::| |:...::.|    |..:.:|.|
  Rat   854 CQIIIFQAVFLGLLAGLVVLFYFYPVRCE 882

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stetNP_788450.1 EF-hand_7 87..157 CDD:463900
Rhomboid 262..428 CDD:426384 43/168 (26%)
Rhbdf1XP_038941805.1 Rhomboid_SP 142..336 CDD:463639
Rhomboid 699..842 CDD:426384 44/182 (24%)
Blue background indicates that the domain is not in the aligned region.

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