DRSC/TRiP Functional Genomics Resources

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Protein Alignment stet and Rhbdl3

DIOPT Version :9

Sequence 1:NP_788450.1 Gene:stet / 38169 FlyBaseID:FBgn0020248 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001099289.1 Gene:Rhbdl3 / 287556 RGDID:1311901 Length:404 Species:Rattus norvegicus


Alignment Length:400 Identity:153/400 - (38%)
Similarity:243/400 - (60%) Gaps:32/400 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 EAELRRELL-RDKWKLLFDMFDPEGFGEISVEEFLEALKSPEFLSQVPMNKRELLLERAKKAKLP 141
            |||.|.... .|.||:||:.|||...|.||..:|...|:|..  |::..:|:|:||..|..    
  Rat    26 EAEERLPAAPEDHWKVLFEKFDPGSTGYISTGKFRSLLESHS--SKLDPHKKEVLLALADS---- 84

  Fly   142 TGPGYVTFQDFVNVMSGKRTRSFKCAVHHRDREVCSENDFQLVLNEP--PLFRKMVHAVAMEILP 204
            ...|.:.:|||||:||.||:.||:.|:...:|.:.|    :.:|.|.  .|.::::..||.|.||
  Rat    85 HADGQICYQDFVNLMSNKRSNSFRQAILQGNRRLSS----KALLEEKGLSLSQRLIRHVAYETLP 145

  Fly   205 EERDRKYYADRYTCCPPPFFIILVTLVELGFFVYHSVVTGEAAPRGPIPS--DSMFIYRPDKRHE 267
            .|.|||:|.|.|||||||:|:|.:||:|:..|:|:.|:..:...:...|.  .:..:|.|..|.:
  Rat   146 REIDRKWYYDSYTCCPPPWFMITITLLEVALFLYNGVLLDQFVLQVTHPRYLKNSLVYHPQLRAQ 210

  Fly   268 IWRFLFYMVLHAGWLHLGFNVAVQLVFGLPLEMVHGSTRIACIYFSGVLAGSLGTSIFDPDVFLV 332
            .||::.|:.:|||...||.|||:||:.|:|||||||:|||..:|.:||:||||..|:.|....:|
  Rat   211 AWRYVTYIFMHAGVEQLGLNVALQLLVGVPLEMVHGATRIGLVYVAGVVAGSLAVSVADMTAPVV 275

  Fly   333 GASGGVYALLAAHLANVLLNYHQMR--YGVIKLLHILVFVSFDFGFAIYARYAGDELQLGSSSEF 395
            |:|||||||::|||||:::|:..|:  :.::::...|:.:|.:||.|::.|:        ..|.:
  Rat   276 GSSGGVYALVSAHLANIVMNWSGMKCQFKLLRMAVALICMSMEFGRAVWLRF--------HPSAY 332

  Fly   396 LAIDQAETAGAVSYVAHLAGAIAGLTIGLLVLKSFEQKLHEQLLWWIALGTYLALVVFAIAFNIM 460
            ......      |:||||.|...|:|:|::||:::||:|.:|.||||.:..|...|:||:.:||.
  Rat   333 PPCPHP------SFVAHLGGVAVGITLGVVVLRNYEQRLQDQSLWWIFVTMYTIFVLFAVFWNIF 391

  Fly   461 NGFAMFNIRV 470
             .:.:.::::
  Rat   392 -AYTLLDLKL 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stetNP_788450.1 EFh <75..115 CDD:298682 16/37 (43%)
EF-hand_7 91..156 CDD:290234 24/64 (38%)
Rhomboid 262..428 CDD:279958 68/167 (41%)
Rhbdl3NP_001099289.1 EF-hand_7 36..100 CDD:404394 26/69 (38%)
Rhomboid 205..359 CDD:396315 68/167 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338202
Domainoid 1 1.000 142 1.000 Domainoid score I4562
eggNOG 1 0.900 - - E1_COG0705
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H34700
Inparanoid 1 1.050 270 1.000 Inparanoid score I2933
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1253228at2759
OrthoFinder 1 1.000 - - FOG0000995
OrthoInspector 1 1.000 - - oto97971
orthoMCL 1 0.900 - - OOG6_109404
Panther 1 1.100 - - O PTHR45840
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2844
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.760

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