DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stet and Rhbdl1

DIOPT Version :9

Sequence 1:NP_788450.1 Gene:stet / 38169 FlyBaseID:FBgn0020248 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_659065.1 Gene:Rhbdl1 / 214951 MGIID:2384891 Length:373 Species:Mus musculus


Alignment Length:381 Identity:140/381 - (36%)
Similarity:213/381 - (55%) Gaps:56/381 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 DPEGFGEISVEEFLEALKSPEFLSQVPMN--KRELLLERAKKAKLPTGPGYVTFQDFVNVMSGKR 160
            |||..|.|..:.|...:.|.|    :|::  |.::|:..|:..:    .|.|.:|:.|:::|.||
Mouse    16 DPENTGFIGADTFAGLVHSHE----LPLDPTKLDMLVALAQSNE----RGQVCYQELVDLISSKR 72

  Fly   161 TRSFKCAVHHRDREVCSENDFQLVLNEPPL--FRKMVHAVAMEILPEERDRKYYADRYTCCPPPF 223
            :.|||.|:.:..|.:..:.    :|:||.|  :::.|..||.||||.|.||::|..|:..||||.
Mouse    73 SSSFKRAIANGQRALPRDG----LLDEPGLSVYKRFVRYVAYEILPCEVDRRWYFYRHRTCPPPV 133

  Fly   224 FIILVTLVELGFFV-------------YHSVVTGEAAPRGPIPSDSMFIYRPDKRHEIWRFLFYM 275
            |:..|||.::..|:             ||           |....|..:|.|..|...||||.||
Mouse   134 FMASVTLAQIIVFLCYGARLNKWVLQTYH-----------PEYMKSPLVYHPGHRARAWRFLTYM 187

  Fly   276 VLHAGWLHLGFNVAVQLVFGLPLEMVHGSTRIACIYFSGVLAGSLGTSIFDPDVFLVGASGGVYA 340
            .:|.|...||||..:||:.|:|||||||..||:.:|.:|||||||..||.|....:||.||||||
Mouse   188 FMHVGLEQLGFNALLQLMIGVPLEMVHGVLRISLLYLAGVLAGSLTVSITDMRAPVVGGSGGVYA 252

  Fly   341 LLAAHLANVLLNYHQMR--YGVIKLLHILVFVSFDFGFAIYARYAGDELQLGSSSEFLAIDQAET 403
            |.:||||||::|:..||  |.:::::..||.:|.:.|.|::.|::......|...          
Mouse   253 LCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRFSPPLPASGPQP---------- 307

  Fly   404 AGAVSYVAHLAGAIAGLTIGLLVLKSFEQKLHEQLLWWIALGTYLALVVFAIAFNI 459
                |::||||||:.|:::||.:|:|:|::|.:|..||:.|..|...::|||.:|:
Mouse   308 ----SFMAHLAGAVVGVSMGLTILRSYEERLRDQCGWWVVLLAYGTFLLFAIFWNV 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stetNP_788450.1 EFh <75..115 CDD:298682 6/16 (38%)
EF-hand_7 91..156 CDD:290234 16/59 (27%)
Rhomboid 262..428 CDD:279958 73/167 (44%)
Rhbdl1NP_659065.1 Rhomboid 174..328 CDD:279958 73/167 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 114 1.000 Domainoid score I6057
eggNOG 1 0.900 - - E1_COG0705
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 270 1.000 Inparanoid score I2999
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1253228at2759
OrthoFinder 1 1.000 - - FOG0000995
OrthoInspector 1 1.000 - - otm43860
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45840
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2770
SonicParanoid 1 1.000 - - X2844
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.960

Return to query results.
Submit another query.