DRSC/TRiP Functional Genomics Resources

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Protein Alignment stet and rom-5

DIOPT Version :9

Sequence 1:NP_788450.1 Gene:stet / 38169 FlyBaseID:FBgn0020248 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001379293.1 Gene:rom-5 / 190260 WormBaseID:WBGene00004404 Length:333 Species:Caenorhabditis elegans


Alignment Length:415 Identity:92/415 - (22%)
Similarity:147/415 - (35%) Gaps:120/415 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LSHTQMRYQCTNDAGYDTEHTSLNSDFDEAELRRELLRDKWKLLFDMFDPEGFGEISVEEFLEAL 114
            ||:..:.:.|:...   |:.|||.|.|....||..|.:.:.|            |::....::..
 Worm     2 LSNRLVGFLCSRSF---TKCTSLPSRFTRDGLRDRLRQQELK------------ELTKNHQIKQA 51

  Fly   115 KSPEFLSQVPMNKRELLLERAKKAKLPTGPGYVTFQ-----DFVNVMSGKRT---RSFKCAVHHR 171
            .||:..:..||:.    |.:|.:..|.|  |..||.     |..|....:||   ..|....::.
 Worm    52 FSPDARTVRPMSD----LWKALQFTLAT--GVTTFSIAIVADSWNRRKEERTAPINVFDAVKYYF 110

  Fly   172 DREVCSENDFQLVLNEPPLFRKMVHAVAMEILPEERD-----RKYYADRY---TCCPPPFFIILV 228
            :.:|.:..:::|...|..|...:...|.:.::.:.:.     .:|:.:.|   :.|.|       
 Worm   111 EPKVEAGIEYKLTNGEKHLALLIGLNVVVYLMWKGKSLNPFMTRYFTNSYASKSLCSP------- 168

  Fly   229 TLVELGFFVYHSVVTGEAAPRGPIPSDSMFIYRPDKRHEIWRFLFYMVLHAGWLHLGFNVAVQLV 293
                                                      .|.....|:..:|||.|:.|...
 Worm   169 ------------------------------------------MLLSAFSHSSIIHLGLNMYVLST 191

  Fly   294 FGLP--LEMVHGSTRIACIYFSGVLAGSLGTSIFDPDVF-----LVGASGGVYALLAAHLANVLL 351
            |. |  :|...|..:....|.:..:..|. .||.|..|.     .:||||   |:|||      |
 Worm   192 FA-PHIIEKFMGVEQFWSFYVTAAVVSSF-VSIVDKAVVRSPIRALGASG---AILAA------L 245

  Fly   352 NYHQMRYGVIKLLHILVFV-SFDFGF--AIYARYAGDELQLGSSSEFLAIDQAETAGAVSYVAHL 413
            .|..|:....:|  .|||: :|||..  |:|...|.|  .||....|...|.|         |||
 Worm   246 TYTCMQIPDGRL--SLVFIPNFDFSAQNAVYGIIAFD--LLGLLLRFRLFDHA---------AHL 297

  Fly   414 AGAIAGLTIGLLVLKSFEQKLHEQL 438
            .|::.|:...|.:..:..:|..|.|
 Worm   298 GGSLFGVGYALFLQDALWEKYGEWL 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stetNP_788450.1 EFh <75..115 CDD:298682 6/39 (15%)
EF-hand_7 91..156 CDD:290234 15/69 (22%)
Rhomboid 262..428 CDD:279958 50/175 (29%)
rom-5NP_001379293.1 Rhomboid 169..310 CDD:419717 50/164 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0705
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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