DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stet and RHBDL3

DIOPT Version :10

Sequence 1:NP_788450.1 Gene:stet / 38169 FlyBaseID:FBgn0020248 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001350764.1 Gene:RHBDL3 / 162494 HGNCID:16502 Length:428 Species:Homo sapiens


Alignment Length:245 Identity:105/245 - (42%)
Similarity:150/245 - (61%) Gaps:15/245 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 EAELRRELL-RDKWKLLFDMFDPEGFGEISVEEFLEALKSPEFLSQVPMNKRELLLERAKKAKLP 141
            |||.|.... .|.||:|||.|||...|.||..:|...|:|..  |::..:|||:||..|..    
Human    26 EAEERLPAAPEDHWKVLFDQFDPGNTGYISTGKFRSLLESHS--SKLDPHKREVLLALADS---- 84

  Fly   142 TGPGYVTFQDFVNVMSGKRTRSFKCAVHHRDREVCSENDFQLVLNEP--PLFRKMVHAVAMEILP 204
            ...|.:.:||||::||.||:.||:.|:...:|.:.|    :.:|.|.  .|.::::..||.|.||
Human    85 HADGQIGYQDFVSLMSNKRSNSFRQAILQGNRRLSS----KALLEEKGLSLSQRLIRHVAYETLP 145

  Fly   205 EERDRKYYADRYTCCPPPFFIILVTLVELGFFVYHSVVTGEAAPRGPIPS--DSMFIYRPDKRHE 267
            .|.|||:|.|.|||||||:|:|.|||:|:.||:|:.|..|:...:...|.  .:..:|.|..|.:
Human   146 REIDRKWYYDSYTCCPPPWFMITVTLLEVAFFLYNGVSLGQFVLQVTHPRYLKNSLVYHPQLRAQ 210

  Fly   268 IWRFLFYMVLHAGWLHLGFNVAVQLVFGLPLEMVHGSTRIACIYFSGVLA 317
            :||:|.|:.:|||..|||.||.:||:.|:|||||||:|||..:|.:||:|
Human   211 VWRYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVHGATRIGLVYVAGVVA 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stetNP_788450.1 EF-hand_7 87..157 CDD:463900 27/69 (39%)
Rhomboid 262..428 CDD:426384 31/56 (55%)
RHBDL3NP_001350764.1 EF-hand_7 36..100 CDD:463900 27/69 (39%)
Rhomboid 205..>260 CDD:451297 30/54 (56%)

Return to query results.
Submit another query.