DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stet and stet

DIOPT Version :10

Sequence 1:NP_788450.1 Gene:stet / 38169 FlyBaseID:FBgn0020248 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_313932.4 Gene:stet / 1274741 VectorBaseID:AGAMI1_010126 Length:458 Species:Anopheles gambiae


Alignment Length:235 Identity:38/235 - (16%)
Similarity:90/235 - (38%) Gaps:63/235 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 RLRQQGITE--TPGSHKSSVK----------PR--------VTAKTTVPK---PF-------SLS 89
            |:....:|:  ||.:|.|.::          ||        :...|.:|:   |.       :|.
Mosquito   176 RMMSSQLTQLATPPAHASHLQQLNKLQQLYPPRSFGHPALPIAGVTLMPQLCHPILHQNLSATLY 240

  Fly    90 AEKPRRAAVDNNSLGNGASHNSSSASRVSQLNSPLPTRRIPDHKMHHDEEDSFSVASSSATSIRS 154
            |..|       |.:......:.|:::..:...:.|.:.|.|..:...|:.:          .:.|
Mosquito   241 AGPP-------NGIKQEYGQDISASAMAAAQAAALASLRNPQQQQQQDDSE----------MVIS 288

  Fly   155 FKPKITIGVAPTFSSTSRLERRREFYQKLEEKQKALEAEKRENEKRLKEEQEAVTKQLRKNMAYK 219
            .:|:|.:...|..:......:::..:...:.:|:  :.::::.:..|:::|..   .:.::||.:
Mosquito   289 LEPEIVLQTGPDVNPAQPPPQQQHLFSAHQHQQQ--QQQQQQQQHHLQQQQHC---NMFQHMAPQ 348

  Fly   220 AN-----PVPSFYQEGPPPKQPLKKFPLTRPKSPNLNRRK 254
            |:     .:|      |||..|....|...|..|..::::
Mosquito   349 AHMQHMRSLP------PPPPPPSLTLPPLPPPPPTTHQQQ 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stetNP_788450.1 EF-hand_7 87..157 CDD:463900 10/69 (14%)
Rhomboid 262..428 CDD:426384
stetXP_313932.4 Rhomboid 248..400 CDD:426384 21/133 (16%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.