DRSC/TRiP Functional Genomics Resources

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Protein Alignment stet and Rhbdl1

DIOPT Version :9

Sequence 1:NP_788450.1 Gene:stet / 38169 FlyBaseID:FBgn0020248 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_008765759.1 Gene:Rhbdl1 / 117025 RGDID:620699 Length:433 Species:Rattus norvegicus


Alignment Length:385 Identity:140/385 - (36%)
Similarity:213/385 - (55%) Gaps:60/385 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 DPEGFGEISVEEFLEALKSPEFLSQVPMN--KRELLLERAKKAKLPTGPGYVTFQDFVN----VM 156
            |||..|.|..:.|...:.|.|    :|::  |.::|:..|:..:    .|.|.:|:.|:    ::
  Rat    72 DPENTGFIGADTFAGLVHSHE----LPLDPTKLDMLVALAQSNE----RGQVCYQELVDLVSAMI 128

  Fly   157 SGKRTRSFKCAVHHRDREVCSENDFQLVLNEPPL--FRKMVHAVAMEILPEERDRKYYADRYTCC 219
            |.||:.|||.|:.:..|.:..:.    :|:||.|  :::.|..||.||||.|.||::|..|:..|
  Rat   129 SSKRSSSFKRAIANGQRALPRDG----LLDEPGLGIYKRFVRYVAYEILPCEVDRRWYFYRHRTC 189

  Fly   220 PPPFFIILVTLVELGFFV-------------YHSVVTGEAAPRGPIPSDSMFIYRPDKRHEIWRF 271
            |||.|:..|||.::..|:             ||           |....|..:|.|..|...|||
  Rat   190 PPPVFMASVTLAQIIVFLCYGARLNKWVLQTYH-----------PEYMKSPLVYHPGHRARAWRF 243

  Fly   272 LFYMVLHAGWLHLGFNVAVQLVFGLPLEMVHGSTRIACIYFSGVLAGSLGTSIFDPDVFLVGASG 336
            |.||.:|.|...||||..:||:.|:|||||||..||:.:|.:|||||||..||.|....:||.||
  Rat   244 LTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGVLRISLLYLAGVLAGSLTVSITDMRAPVVGGSG 308

  Fly   337 GVYALLAAHLANVLLNYHQMR--YGVIKLLHILVFVSFDFGFAIYARYAGDELQLGSSSEFLAID 399
            |||||.:||||||::|:..||  |.:::::..||.:|.:.|.|::.|::......|...      
  Rat   309 GVYALCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRFSPPLPASGPQP------ 367

  Fly   400 QAETAGAVSYVAHLAGAIAGLTIGLLVLKSFEQKLHEQLLWWIALGTYLALVVFAIAFNI 459
                    |::||||||:.|:::||.:|:|:|::|.:|..||:.|..|...::|||.:|:
  Rat   368 --------SFMAHLAGAVVGVSMGLTILRSYEERLRDQCGWWVVLLAYGTFLLFAIFWNV 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stetNP_788450.1 EFh <75..115 CDD:298682 6/16 (38%)
EF-hand_7 91..156 CDD:290234 16/63 (25%)
Rhomboid 262..428 CDD:279958 73/167 (44%)
Rhbdl1XP_008765759.1 Rhomboid 234..388 CDD:279958 73/167 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 142 1.000 Domainoid score I4562
eggNOG 1 0.900 - - E1_COG0705
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1253228at2759
OrthoFinder 1 1.000 - - FOG0000995
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.780

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