Protein Alignment rho and PCP1

DIOPT Version :9

• Sequence 1: NP_001261255.1
• Gene: rho / 38168
• FlyBaseID: FBgn0004635
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_011615.1
• Gene: PCP1 / 852993
• SGDID: S000003333
• Length: 346
• Species: Saccharomyces cerevisiae
• Alignment Length: 258
• Identity: 53/258 - (20%)
• Similarity: 82/258 - (31%)
• Gaps: 117/258 - (45%)

  Fly    99 QHWPWFI--------LVISIIEIAIFAYDRYTMPAQNFGLPVPIPSDSVLVYRPDRRLQVWRFF- 154
            :|.|.|.        ||.:::.|.:..:..:.:|                        :.|||.
Yeast   130 EHVPPFTYFKTHPKNLVYALLGINVAVFGLWQLP------------------------KCWRFLQ 170

  Fly   155 SYM-----------------FLHANWFHLGFNIVIQLFFGIPLEVMHGTARIGVIYMAGVFAGSL 202
            .||                 |.|..::|||.|::....||..|..|.|.:....:||....||||
Yeast   171 KYMLLQKDYVTSKISIIGSAFSHQEFWHLGMNMLALWSFGTSLATMLGASNFFSLYMNSAIAGSL 235

  Fly   203 GT---------SVVDSEVFLVGASGGVYALL------------------------AAHLANITLN 234
            .:         ::|...   :||||.::.:|                        .|.||::..|
Yeast   236 FSLWYPKLARLAIVGPS---LGASGALFGVLGCFSYLFPHAKILLFVFPVPGGAWVAFLASVAWN 297

  Fly   235 YAHMKSASTQLGSVVIFVSCDLGYALYTQYFDGSAFAKGPQVSYIAHLTGALAGLTIGFLVLK 297
            .|                    |.||....||           |.|||.|::.|:..|:.:.|
Yeast   298 AA--------------------GCALRWGSFD-----------YAAHLGGSMMGVLYGWYISK 329

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rho	NP_001261255.1	Rhomboid	144..297	CDD:279958	45/203 (22%)
PCP1	NP_011615.1	Rhomboid	186..329	CDD:396315	40/176 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0705
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810