Protein Alignment rho and ru

DIOPT Version :9

• Sequence 1: NP_001261255.1
• Gene: rho / 38168
• FlyBaseID: FBgn0004635
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_524790.1
• Gene: ru / 44856
• FlyBaseID: FBgn0003295
• Length: 341
• Species: Drosophila melanogaster
• Alignment Length: 336
• Identity: 157/336 - (46%)
• Similarity: 213/336 - (63%)
• Gaps: 28/336 - (8%)

  Fly    28 EHATAAKETIIDIPAACSSSSNSSSYDTDCSTASSTCCTRQGEHIYMQREAIPATPLPESEDIGL 92
            |.......|::.:|.|..||.:        ......||.:......:||.:..|.....|.|.|.
  Fly    24 EEGEMPPSTVLQMPPAPLSSKS--------GLVLGVCCDQLMAVQPVQRASGAAATKSNSPDWGN 80

  Fly    93 LKYVHRQ------HW--PWFILVISIIEIAIFAYDRYTMPAQNFGLPVPIPSDSVLVYRPDRRLQ 149
            .:..|.:      .|  |:||::.:::|:.:|.:           :....|.||:||||||:|||
  Fly    81 HRAKHHEGSAAPFKWIPPFFIILATLLEVLVFLW-----------VGADPPEDSLLVYRPDQRLQ 134

  Fly   150 VWRFFSYMFLHANWFHLGFNIVIQLFFGIPLEVMHGTARIGVIYMAGVFAGSLGTSVVDSEVFLV 214
            :|||.||..|||:|.|||:|::.||.||:|||::||:.|.||||||||.||||||||||||||||
  Fly   135 LWRFLSYALLHASWLHLGYNVLTQLLFGVPLELVHGSLRTGVIYMAGVLAGSLGTSVVDSEVFLV 199

  Fly   215 GASGGVYALLAAHLANITLNYAHMKSASTQLGSVVIFVSCDLGYALYTQYFDGSAFAKGPQVSYI 279
            ||||||||||||.||::.||:..|:....||.:|::||.||||||||::..........|.||||
  Fly   200 GASGGVYALLAAQLASLLLNFGQMRHGVIQLMAVILFVFCDLGYALYSRELAMHQLQTRPSVSYI 264

  Fly   280 AHLTGALAGLTIGFLVLKNFGHREYEQLIWWLALGVYCAFTVFAIVFNLINTVTAQLM-EEQGEV 343
            ||:||||||:::|.|:|:........:.:.||||||:|.|:.|.|.|||:|||||||: ||:|:|
  Fly   265 AHMTGALAGISVGLLLLRQLDGGLRPRPLRWLALGVWCIFSAFGIAFNLVNTVTAQLLAEEEGQV 329

  Fly   344 ITQHLLHDLGV 354
            |.|||::|||:
  Fly   330 IRQHLMNDLGM 340

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rho	NP_001261255.1	Rhomboid	144..297	CDD:279958	97/152 (64%)
ru	NP_524790.1	Rhomboid	129..282	CDD:279958	97/152 (64%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45457247
Domainoid	1	1.000	84	1.000	Domainoid score	I2842
eggNOG	1	0.900	-	-		E1_COG0705
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	45	1.000	Inparanoid score	I2672
Isobase	1	0.950	-	0	Normalized mean entropy	S5174
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D102232at50557
OrthoFinder	1	1.000	-	-		FOG0000995
OrthoInspector	1	1.000	-	-		mtm1037
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR45840
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X418
	11	10.850