Protein Alignment rho and Rhbdf1

DIOPT Version :9

• Sequence 1: NP_001261255.1
• Gene: rho / 38168
• FlyBaseID: FBgn0004635
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: XP_038941805.1
• Gene: Rhbdf1 / 303008
• RGDID: 1305075
• Length: 907
• Species: Rattus norvegicus
• Alignment Length: 330
• Identity: 68/330 - (20%)
• Similarity: 115/330 - (34%)
• Gaps: 100/330 - (30%)

  Fly    22 EASQEEEHATAAKETIIDIPAACSSSSNSSSYDTDCSTASSTCC--TRQGEHI-----------Y 73
            |.|.|:.|......|...|....|:.::::....||......||  |:....|           |
  Rat   609 EPSSEDPHEWPEDITKWPICTKNSAGNHTNHPHMDCVITGRPCCIGTKGRCEITSREYCDFMKGY 673

  Fly    74 MQREAIPATPLPESEDI-GLLKYVHRQHWPWFILVISIIEIAIFAYDRYTMPAQNFGLPVPIPSD 137
            ...||...:.:...:|: |||.:::.:
  Rat   674 FHEEATLCSQVHCMDDVCGLLPFLNPE-------------------------------------- 700

  Fly   138 SVLVYRPDRRLQVWRFFSYMFLHANWFHLGFNIVIQLFFGIPLEVMHGTARIGVIYMAGVFAGSL 202
                 .||   |.:|.:..:||||...|...::..|:.....||.:.|..||.:||:.....|:|
  Rat   701 -----VPD---QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNL 757

  Fly   203 GTSVVDSEVFL-----VGASGGVYALLAAHLANITLNY---AHMKSASTQLGSVVIFVSCDLGYA 259
            .     |.:||     ||.:|..:.:||.....:..::   |....|..:|.:||:|:
  Rat   758 A-----SAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFL------- 810

  Fly   260 LYTQYFDGSAFAKGPQVSYIAHLTGALAGLTIGFLVLKNFGHREYEQLIWWLALGVY---CAFTV 321
                    .||...|.:...||::|.::||.:.|..|......:::         :|   |...:
  Rat   811 --------FAFGLLPWIDNFAHISGFVSGLFLSFAFLPYISFGKFD---------LYRKRCQIII 858

  Fly   322 FAIVF 326
            |..||
  Rat   859 FQAVF 863

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rho	NP_001261255.1	Rhomboid	144..297	CDD:279958	42/160 (26%)
Rhbdf1	XP_038941805.1	Rhomboid_SP	142..359	CDD:403706
		Rhomboid	699..840	CDD:396315	42/206 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0705
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1253228at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X418
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.820