Protein Alignment rho and Rhbdl2

DIOPT Version :9

• Sequence 1: NP_001261255.1
• Gene: rho / 38168
• FlyBaseID: FBgn0004635
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: XP_038965543.1
• Gene: Rhbdl2 / 298512
• RGDID: 1308295
• Length: 302
• Species: Rattus norvegicus
• Alignment Length: 271
• Identity: 95/271 - (35%)
• Similarity: 149/271 - (54%)
• Gaps: 36/271 - (13%)

  Fly    86 ESEDIGLLKYVHR--QHW-------------------PWFILVISIIEIAIFAYDRYTMPAQNF- 128
            |.:|....:.|||  ..|                   |.||::||:.|:|:|.|.....|.:.:
  Rat    34 EGKDFPRGRKVHRIVSKWMLPEPVRRTYLERANCLPPPLFIVLISLAELAVFIYYAVWKPQKQWI 98

  Fly   129 ----GLPVPIPSDSVLVYRPDRRLQVWRFFSYMFLHANWFHLGFNIVIQLFFGIPLEVMHGTARI 189
                |:     .:|.|.|||::|.:.|||.|||.:||...|:..|:.:||..|||||::|...|:
  Rat    99 TLDTGI-----LESPLTYRPEKREEAWRFISYMLVHAGVQHIVGNLFMQLVLGIPLEMVHKGLRV 158

  Fly   190 GVIYMAGVFAGSLGTSVVDSEVFLVGASGGVYALLAAHLANITLNYAHMKSA--STQLGSVVIFV 252
            |::|:|||.||||.:|:.|....|||||||||||:..:..|:.:|:..|..|  ..:|..:::.|
  Rat   159 GLVYLAGVLAGSLASSIFDPLKSLVGASGGVYALMGGYFMNVIVNFREMIPALGIVRLLVIILIV 223

  Fly   253 SCDLGYALYTQYFDGSAFAKGPQVSYIAHLTGALAGLTIGFLVLKNFGHREYEQLIWWLALGVYC 317
            :.|:|:|||.::|   ..|.|..||:.||:.|..||:::|:.|...|.....:...:|:::..|.
  Rat   224 ASDMGFALYRRFF---VPANGSPVSFAAHIAGGFAGMSVGYTVFSCFDKTLLKDPRFWISIAAYV 285

  Fly   318 AFTVFAIVFNL 328
            |..:||:.||:
  Rat   286 ACLLFAVFFNI 296

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rho	NP_001261255.1	Rhomboid	144..297	CDD:279958	66/154 (43%)
Rhbdl2	XP_038965543.1	Rhomboid	113..265	CDD:396315	66/154 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0705
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1253228at2759
OrthoFinder	1	1.000	-	-		FOG0000995
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_107191
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	4.720