DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SA-2 and stag2a

DIOPT Version :9

Sequence 1:NP_612109.3 Gene:SA-2 / 38167 FlyBaseID:FBgn0043865 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_001093498.1 Gene:stag2a / 567168 ZFINID:ZDB-GENE-030131-3432 Length:1246 Species:Danio rerio


Alignment Length:1059 Identity:255/1059 - (24%)
Similarity:436/1059 - (41%) Gaps:234/1059 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 DATNKSLLQMILSRKRLSPTNKRNSHIESVAKYWGEFYLDSPTAALVALLQFVVEVSGSHYQIPD 109
            |..|.||.:::    ||.     .|..:||...|.|.|.....:||:.|:.|.:..||....:..
Zfish    65 DMENLSLFEIV----RLG-----KSATQSVVDDWIESYKTDRDSALLELINFFIHCSGCKGTVSF 120

  Fly   110 DTSMPFSYSDILSNSSSHF-SNTHIYPL-IRKPA-DVFVNQVGSFLNALL------LVANKFRSD 165
            :.......|:|:...:..| .::..||| :..|| ..|...:..|:..|:      ::.:::..|
Zfish   121 EMFRNMQNSEIIRKMTEEFDEDSGDYPLAMAGPAWKKFKTNLCEFIATLVRQCQYSIIYDEYMMD 185

  Fly   166 SYQLFLVQLTNFVMACSESNIRTFRHTATMIGLKIMTIL-------------------------- 204
            :       |.:.:...|:|.:|.||||:|:..:|:||.|                          
Zfish   186 T-------LISLLTGLSDSQVRAFRHTSTLAAMKMMTALVNVALNLSINLDNTQRQYETERNKSI 243

  Fly   205 ---------------SDLKSLDDEIAMTVWMQMFNSMFVARSRDIVTDIRLLCISELGQWFARYP 254
                           .:|:...|||. .:...:|..:|:.|.||::.:||::||.|:|.|...|.
Zfish   244 GKRANERLELLLQKRKELQENQDEIE-NMMNAIFKGVFIHRYRDVIAEIRVVCIEEIGMWMKMYS 307

  Fly   255 HCHLQPTSLRIFYEALNDGSGDV-IQCSLDNISVLCRKDVLFSEIVALTSEFREILVELCLGKED 318
            ...|..:.|:.....:.|..|:| ::| |..:..|.....|.:.:...||.|::.:|.:.|.||.
Zfish   308 EAFLNDSYLKYVGWTMYDKQGEVRLKC-LTALQGLYYSRELNARLELFTSRFKDRIVSMTLDKEY 371

  Fly   319 AIAEKSVQFLTHFHVLSAEILTDDVCRVLEQLIMAANRGLAQAAADLF---ILRRNGLDGETFCQ 380
            .:|.::::.||.....|.|:|..:.|..:..|:.:|:|.:|.||.:..   :...:|.:.|...:
Zfish   372 DVAVQAIKLLTLVLQSSDEVLMAEDCESVYHLVYSAHRPVAVAAGEFLYKKLFSHHGPEDEGRPR 436

  Fly   381 RVKHLLQ---------LFIECG-HEQADYLVDSLIDNC--ELVLDWKSMIAVLLENPKSRE--LS 431
            |.:..|.         .|:|.. ||...||||||.| |  ||:.||:|||::||:.|...|  ||
Zfish   437 RGRQCLNANLIRTTVLFFLESELHEHGAYLVDSLWD-CASELLKDWESMISLLLDEPFPGEEALS 500

  Fly   432 DIHCSSLIAILLAGVKQATAGEIPPGRYTKD---LKREPRQGAQERA--TKCLAPVLPELLRTYA 491
            |....:||.|:...|:|......|.||.|..   ..:|.:....:|.  |:..|..||.||..|:
Zfish   501 DAQEVALIEIMFCAVRQTCECHPPIGRGTGKRVLTAKEKKTQLDDRTKITETFAVALPLLLAKYS 565

  Fly   492 NRLQDIERLLELPKYFCFDYY-------HEQNRMGQLNELVEHFELIIFDQTSSTTVLQITVKTL 549
            ...:.:..||:.|:||..:.|       |....:.|:.::||        :.:.|.||:....|.
Zfish   566 MDPEKVTNLLQFPRYFDLEIYTTGRLEKHLDALLRQVRDVVE--------KHTDTDVLEACSMTF 622

  Fly   550 EFL--------NRMIPIPLTK-QLLNSAVTNYKMAWHRTQD---TSPSRSTHNESNRLLATLRLL 602
            :.|        ||   :.|.: |:|:..:..:    ||..:   ........:::.::|:||:.:
Zfish   623 QALCNDEFTIYNR---VDLVRSQMLDEQIDKF----HRLLEDFLLEGEEPDEDDTYQVLSTLKRI 680

  Fly   603 TVLSGHFNLSKWDLTEPLLFSLKMLLRQRRLPNGDDLPPEAFSLYLKAC---------------- 651
            |......:|:|||     ||:....|....|.|||  .||....:...|                
Zfish   681 TAFHNAHDLTKWD-----LFTSNYRLLNSGLQNGD--MPEQIVAHALQCTHYVILWHLAKVSEGS 738

  Fly   652 ---------------FCCLCWDMENLEGTALNNVDMDEYCDVLHHNLEDYLYVTFSLV--GKSNT 699
                           ||.:|....|...||:........||.|       |..::.:|  |:...
Zfish   739 ASKDDMVLLRRQVRAFCLMCQRYLNSMSTAVKEQAFTILCDAL-------LIFSYQIVASGREIL 796

  Fly   700 EPLAYPCFSYTCDLFVLHGNLCGSSNPSIRSVAHVPSGNELDILEGFLMEHFLELSPSDLMLETN 764
            |||.:                  |.:.|::|.           |..|:::|.......|...:..
Zfish   797 EPLVF------------------SPDASLQSE-----------LLNFILDHVFVEQDEDGSTDDE 832

  Fly   765 S---DQLQRIRSILTSYLKVVCLGVVPTMRASKFYEYYVKYHAPFGDVMRCSMELALQRNPIHFA 826
            :   :.|.|.|::|.::.|::...||.....:..::.|::|:..:||:::.:|..|.|.:.|..|
Zfish   833 AGKIEALHRRRNLLAAFCKLIIFNVVEMKTGADVFKQYMRYYTDYGDIIKETMSKARQIDKIQCA 897

  Fly   827 MTMLHTCLLLYAKVFPD-----DTRHAAGQRALRPAEFSELMELANRLAKILISNPMEHRECVIA 886
            .|::.:...|:.::..|     |...:|         |..:.|||.|.|.....:.::.||.:..
Zfish   898 KTLILSLQQLFNEMLSDLGCNFDRSTSA---------FCGIKELARRFALTFGLDQLKTREAIAM 953

  Fly   887 LHRSGILFVFELAQKQPTEATK-----KLPFLRVLKVFVPLLLVQDKTRILNFFEPYE--QLIIP 944
            ||:.||.|.|    |:|:...:     .|.||.:|..|...||.|||..:..:.|.:.  |:.: 
Zfish   954 LHKDGIEFAF----KEPSPQGEGGPPLNLAFLDILSEFSSKLLRQDKKTVHVYLERFMTFQMAL- 1013

  Fly   945 TCNRNDI-AHLKEYRNALR 962
              .|:|. ..|..|||:|:
Zfish  1014 --QRDDCWLPLISYRNSLQ 1030

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SA-2NP_612109.3 STAG 134..217 CDD:285686 26/131 (20%)
stag2aNP_001093498.1 STAG 144..252 CDD:285686 22/114 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595638
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5537
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60131
OrthoDB 1 1.010 - - D167826at2759
OrthoFinder 1 1.000 - - FOG0000572
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11199
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.820

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